ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4282_18

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(16796..17554)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C582_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 249.0
  • Bit_score: 347
  • Evalue 1.10e-92
  • rbh
ABC transporter permease {ECO:0000313|EMBL:EIM76984.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 249.0
  • Bit_score: 347
  • Evalue 1.50e-92
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 242.0
  • Bit_score: 313
  • Evalue 5.40e-83
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitratireductor aquibiodomus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCGGCGCGGAGCCGTCCTCGCGGTCGCTCTGGCGGCCCTCGCTCTGGCCGGAGCGGTCTGGCAGCCGCACGACCCGGACGCGGTCGACATGCTGGCGCGCCATGCGGCACCTTCGCTGTCGCACCCGCTCGGCACAGACCATCTGGGCCGCGACCTCGCCTCGCGCATGCTGGTGGCGGCATGGCGCACCGGGCTGGTGGTCGTCATCGTCGGAGCCATCGGGCTTGCCGGCGGCTCGGCGCTGGGGACCATCGCCGCCATCCTCGGCGGCTGGCGCGAACGCCTGATCCTGCGCGGCGCAGAGCTGTTCATCGTGGTGCCGACGCTGGTGTGGGCGCTGACGGCCGCGGCACTGTTCGGCCTGTCGCCGCTGACGGCGGGTGTGGCGCTCGGGCTCGCCGGCGTCGGCCCCTACGCGCTGTTTTCCAACGCCCTGACGCACCGCGTGCTCGGCCAGCCCTTCGTGCTGGCGGCGACCGCGCTCGGCGCGGCGCGACTGCGGCTCATGCTGCGCCACGTCCTGCCCAACACGCTGCCGCTGATCTTCGCCTATGTCGGCAGCCAGGCGGGCCAGTCGGTGATCGCCTATGCCTCGCTCGCCTTCATCGGGCTCGGCGCCGATCCGTCGAAGCCGGACTGGGGCTCGATGCTCTACGAATACCGGATGTTCGTCTTCGACCGGCCGATGCTGACGATCTGGCCGGGGCTGGCGATCGCGGCGGTGACGTGGACGCTGAACCNNNNNNGGCCTCAATAG
PROTEIN sequence
Length: 253
MRRGAVLAVALAALALAGAVWQPHDPDAVDMLARHAAPSLSHPLGTDHLGRDLASRMLVAAWRTGLVVVIVGAIGLAGGSALGTIAAILGGWRERLILRGAELFIVVPTLVWALTAAALFGLSPLTAGVALGLAGVGPYALFSNALTHRVLGQPFVLAATALGAARLRLMLRHVLPNTLPLIFAYVGSQAGQSVIAYASLAFIGLGADPSKPDWGSMLYEYRMFVFDRPMLTIWPGLAIAAVTWTLNXXXPQ*