ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4282_20

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(18509..19009)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide-binding protein OppA n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U9W9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 250
  • Evalue 9.00e-64
Oligopeptide-binding protein OppA {ECO:0000313|EMBL:EGP57115.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 250
  • Evalue 1.30e-63
ABC-type dipeptide/oligopeptide/nickel transport systems, substrate binding component similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 9.80e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGCGGACCAGGGACGGCAAGGCGCTGCGGCTGACGGCCGTGGCCTACCCGCAGCGGCCGGACCTCGTCACCATGCTGCCGGTGCTCAAGGCCGACCTCGCCAAGATTGGCGTCGCACTCGACACGCAGGTGGCGGAGAATGTCGGCGAGGTCGCGACAAGCGGCGACTTCGACATCCTGCTGTGGGCGCAGCACACGGCCCCCAGCGGCGACCCGGCCTTCTTCTTCAACTCGATGCTGCGCGGCGGCGCGCCGCTCAACTACGCTCGCTACGCAAACGCCGATTTCGACGCCATCATCGACGGCTTCGCCAGGACGGCAGACGCCGACGCGCGCGCAAAAATCGCGCTCGCCGCGCAGGAGAAGCTGTTCGAGGACGTACCCACCAGCTTCCTCGTCTCGCCCGAATGGCATGTCGGCCTGTCGAAGCGGCTGGCCAACTACGAGCCCTGGGGATCGGACTACCATGTGATCCGCGCCGAGATGGGCGAGACGCGGTAG
PROTEIN sequence
Length: 167
VRTRDGKALRLTAVAYPQRPDLVTMLPVLKADLAKIGVALDTQVAENVGEVATSGDFDILLWAQHTAPSGDPAFFFNSMLRGGAPLNYARYANADFDAIIDGFARTADADARAKIALAAQEKLFEDVPTSFLVSPEWHVGLSKRLANYEPWGSDYHVIRAEMGETR*