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SCNpilot_expt_1000_bf_scaffold_3512_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 10934..11623

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSK4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 229.0
  • Bit_score: 270
  • Evalue 2.00e-69
Putative glycosyltransferase {ECO:0000313|EMBL:GAO39045.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 226.0
  • Bit_score: 305
  • Evalue 7.80e-80
lipopolysaccharide synthesis sugar transferase similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 229.0
  • Bit_score: 231
  • Evalue 2.40e-58

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAAGCGGCTCCTGGACATCGTCGCATCCGCCGCGGGCCTTCTCGTGCTCTCGCCCGTGCTTGCCGTCATCCTCTTCCTCGTCTGGCGGCAGGATCGGCATTCGCCCTTCTACATCGCCGAGCGCGCCGCGCGCGGCGGCGGCTCGTTCCGCATGGTCAAGGTGCGCTCGATGGTCGTCAACGCCGACCGCACCGGCGTCGAATCGACGAGTGCCGCCGACAACCGCATCACCCCGCTCGGCCATTTCATCCGCCGTTGGAAGCTCGACGAGATCACCCAGCTCTGGAACGTGCTGAAGGGCGACATGAGCCTGGTCGGCCCGCGCCCCAACACGCTGCGCGAGGTGGCGAAGTACACGCCCGCCGAGCGCGGCCTGCTTGCCGTGCGCCCCGGCATCACCGATCTCGCCTCGATCGTCTTTTCCGACGAGGGCGACATCCTCAAGGACATGGCCGATCCGGACGACGCCTATGACAAGCTGATCCGGCCCTGGAAGAGCCGGCTCGGGCTGCTCTATGCGAAGAATGCCGGCGTGCTTCTCGACATCCGACTGATGTGGCTCACGATCCTCGCCATCCTCGACAAGCCGAAGGCCCTACGCGGCGTCGGCCGCGAGCTGGTGCGCCTCGGCGCCGAACCCGACCTCGTCGCAGTCGCCCGCCGCGACCGGCCGCTGGCTCCGGCGTGA
PROTEIN sequence
Length: 230
MKRLLDIVASAAGLLVLSPVLAVILFLVWRQDRHSPFYIAERAARGGGSFRMVKVRSMVVNADRTGVESTSAADNRITPLGHFIRRWKLDEITQLWNVLKGDMSLVGPRPNTLREVAKYTPAERGLLAVRPGITDLASIVFSDEGDILKDMADPDDAYDKLIRPWKSRLGLLYAKNAGVLLDIRLMWLTILAILDKPKALRGVGRELVRLGAEPDLVAVARRDRPLAPA*