ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3648_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(9843..10472)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB24_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 208.0
  • Bit_score: 346
  • Evalue 2.00e-92
Putative MFS-type transporter YhjX {ECO:0000313|EMBL:CEG08586.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 208.0
  • Bit_score: 346
  • Evalue 2.80e-92
MFS transporter similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 333
  • Evalue 4.20e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGGTGCTGTGCCTGAACGTCACCGCCGGCATCGGCGTGCTCGGCCAGGCCTCGGCGATGAGCCAGGAGATGTTCCCCGGCCAGATCACGCCGGTCGCGGCGGCAGGCCTCGTCGGCCTGATGAGCCTGTTCAACATGGGCGGCCGCTTCGCCTGGGCGTCGACCTCCGACTATATCGGCCGCCGCAACACCTACTTCGTGTTCATGGTGCTGGGCTTCGTTCTCTACTGCCTGGTGCCCTACACCGGCTCGGTCGGCTCGGTGACCGGCTTCGTGCTCTGCTTCCTGATCATCATCTCGATGTATGGCGGCGGCTTCTCGACGGTTCCGGCCTATCTGCGCGACATGTTCGGCACCCGCTATGTCGGCGCCATCCACGGCCTGCTGCTCACGGCGTGGTCGGCGGCCGGCATCTTCGGGCCGGTGCTCGTCAACTACATCCGCGAGTACAACGTCACCCACGGCGTGCCCAACGCGCAGGCCTACAACACGACGATGTACATCATGGCCGGGCTGCTGGTGATCGGCTTCATCTGCAATTTCCTGGTCAAGGCGGTGGATGCGCGCTTCCACATGAAGCCGGAGAGCGAGCCGGCGCTCGACATCGCCGCCAGCGCGGCGAAGGCCTGA
PROTEIN sequence
Length: 210
VVLCLNVTAGIGVLGQASAMSQEMFPGQITPVAAAGLVGLMSLFNMGGRFAWASTSDYIGRRNTYFVFMVLGFVLYCLVPYTGSVGSVTGFVLCFLIIISMYGGGFSTVPAYLRDMFGTRYVGAIHGLLLTAWSAAGIFGPVLVNYIREYNVTHGVPNAQAYNTTMYIMAGLLVIGFICNFLVKAVDARFHMKPESEPALDIAASAAKA*