ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5387_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(14852..16024)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI000346FFAC similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 394.0
  • Bit_score: 231
  • Evalue 1.30e-57
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EFQ63095.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 389.0
  • Bit_score: 227
  • Evalue 2.70e-56
Bcr/CflA family multidrug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 390.0
  • Bit_score: 225
  • Evalue 3.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GTGAAGTCGGGCACGATCGTCGCATTCTGCGGGCTGCTGACCGCCGGCTCGGCGATCTCGATCGACATCACGCTGCCGTCGATCTCGGCGATGGTGGCCGACCTCGACGCGCCCTATGCGGCCGTGCAGATGACGATCACCGTCTACATGTTCGCGGCGGGGCTGGCGCAGCTCTTCTGGGGGCCGGCGTCGGACCGCTTCGGCCGCCGCCCGGTGCTGGCGGTGGGGCTGGCGATCTTCCTCGTCGGCAGCGTGCTCGCCACCTTCGCGCCGACGGTCGACCTGCTGATCGCCGGGCGCGCGATCCAGGGCGCGGGCGGGGCGGCGGCGATCGTGCTCGGCCGCACCATCCTGCGCGACCTGTTCACCGGCAAGGAGCTGGCGCGCAACCTCGCCTTCGCCTCGGCGGTATTCGCGGCCGGGCCGATCGTGGCGCCGTTCGCCGGCGGCTTGATCGCCTGGCTGTTCGGCTGGCGGGCGGTGTTCGGGCTGCTGGCGCTGGTCGCGGTCGCCGCCCTGCTGGTGCTTATCAGGCTGCCCGAGACGATCCCCGCGCGCGACCCGTCGGCGCTGAAGCTTTCGACCTATGGCGCGCGCATGCGCCGCTTCTGGAGCGAGCCGCAATCGCGCTGGTTCCAGATCGTCGCGACGCTCGGCATGGGCGCGATGCTGCTCATCATCGCGTCGGCGCCGCGCATCTATGACGAGGCGTTCGGGCTGACCGGGCTCGCCTTCGCCTCGTTCTTCGCCTTCCACGGCTTCGGCATCATCGTCGGCCAGATCGCCAACCGCCGGCTGATCGCCACGCTCGGCGTGGTGCCGGCGATAATCATCGCCGGGGTGATCATGGTGACGGCCTCGACGCTGATCCTGATGACCGGCCTGACCGGCATCGCCAGCGCCTGGACGACGACCGGCCTGCTGATCTTCTTCGCGACGAGCTATCTCGTCGTCGCCTCCAACTCGACAGCGCTGGTGCTCGACCCGCACGGCACGATGGCGGGCTTCGCCGCCTCGATCTTCGGCGTCGTCATGCAGATCGGCGCGGCCCTGATCGTTTCGGCGATCGTGCCGTTCACGGGCGGCAGCGTGTCCGCCTTCGCGCTGGCGCTGCTGGCGATCTGCGCCGCCTGCCTCGTGCTGGCCGCCGGCTGGCGGCCGCGCCGGGCCTGA
PROTEIN sequence
Length: 391
VKSGTIVAFCGLLTAGSAISIDITLPSISAMVADLDAPYAAVQMTITVYMFAAGLAQLFWGPASDRFGRRPVLAVGLAIFLVGSVLATFAPTVDLLIAGRAIQGAGGAAAIVLGRTILRDLFTGKELARNLAFASAVFAAGPIVAPFAGGLIAWLFGWRAVFGLLALVAVAALLVLIRLPETIPARDPSALKLSTYGARMRRFWSEPQSRWFQIVATLGMGAMLLIIASAPRIYDEAFGLTGLAFASFFAFHGFGIIVGQIANRRLIATLGVVPAIIIAGVIMVTASTLILMTGLTGIASAWTTTGLLIFFATSYLVVASNSTALVLDPHGTMAGFAASIFGVVMQIGAALIVSAIVPFTGGSVSAFALALLAICAACLVLAAGWRPRRA*