ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11207_11

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(8607..9047)

Top 3 Functional Annotations

Value Algorithm Source
Auxin-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HST7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 139.0
  • Bit_score: 156
  • Evalue 2.70e-35
Auxin-binding protein {ECO:0000313|EMBL:EYD74270.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 145.0
  • Bit_score: 158
  • Evalue 9.80e-36
auxin-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 140.0
  • Bit_score: 131
  • Evalue 1.70e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubellimicrobium mesophilum → Rubellimicrobium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGTCACGCAACACGAAACTCCTCGGCGCGGCGGCGATGCTGATCGTGCTCGCGGCCGCCGTCTTCTCCGCCATGCGCTTCTTCATGGCGCCGCCGGACGACCTCGACCTCGCGCGCAGCAAGGCGAGCGCCGCCGGGCTCTACCGGGTGACGATCGCGCCCGAGCTGGAGCCGATCGAGCAGGGACCGCTGCAGGCCTTCCTCGTCACGGTCACCACGCCGGACGGGAAGCCGGTCGACGACGCGAAGCTGTCGGTCGACGGCGGCATGCCGCAGCACGGCCACGGCCTGCCGACGCGACCGCAGGCGAGCGGCCCGCTCGGCGAGGGCCGCTACCGCATCGAGGGGCTGCGCTTCCACATGAGCGGCTGGTGGGTGCTCAAGATCGGCATCGAGGGGCCGGCCGGCAGGGACGAGGCTGACTTCAACCTCGTGCTCTGA
PROTEIN sequence
Length: 147
MSRNTKLLGAAAMLIVLAAAVFSAMRFFMAPPDDLDLARSKASAAGLYRVTIAPELEPIEQGPLQAFLVTVTTPDGKPVDDAKLSVDGGMPQHGHGLPTRPQASGPLGEGRYRIEGLRFHMSGWWVLKIGIEGPAGRDEADFNLVL*