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SCNpilot_expt_1000_bf_scaffold_4392_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1162..1941)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE87_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 260.0
  • Bit_score: 371
  • Evalue 7.10e-100
  • rbh
cpaD; pilus assembly protein CpaD similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 260.0
  • Bit_score: 371
  • Evalue 2.20e-100
  • rbh
Pilus assembly protein CpaD {ECO:0000313|EMBL:AGB69688.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 260.0
  • Bit_score: 371
  • Evalue 1.00e-99

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
GTGACAGCAGCCTTTTCAACGAGCTTAGCGAGAGATCAAAAGATGGTCAGCCCCAAAAGCAATGCGCCTCGCAGCGTCCGGCCACGCTTCTCGAAACCGATGCTGATCGCTCCGGTCCTGGCTCTGATATCGGCTGTCAGCGGCTGCGCCGGCTCCCCGGACGGCATGGCGACGAGCGCCATCAGGGACGATTACCGTCAGCGCCATCCCATCGTGCTCACAGAAAAGGAGCACAGCGTCGACATCCCCGTCGCTGTCAGCGATCGGCACCTGACGACAGGCATGCGCGACATGGTTCGCGGTTTCGTGCAGGATTATCGTGCCCATGCAAGCGGCACGGTGGAAATCCTGTCGCCGCGGCAATCGGAAAATGCGCTGGCCGCATCGGCACTCAACTCGCAGATCCGTCGGGAACTGGTGACGAGCGGCATTCCGTCGGGGCGGATCGTCAACACCTATTATGCGGCGAACGGCCCCGGCGATGCGGCGCCGATCCGCCTGCGCTTCTCGGCAACGACGGCAGCCACCAACGCCTGCGGCCAATGGCCGGACGACCTCGCCGATAACGCCTTCGACAATCAGAACTATTACAATTTCGGCTGCGCCACCCAGCAAAATCTGGCAGCGCAGGTCGCCAATCCGACCGATCTGATCTCGCCGCGCGCGATGACGCCGATCGATGCCGATCAGCGTAGCAAGGTCATCAACGATTATCGTACGGGTGCGACCCCCACCAGCACGGCTTCGGTCGGCGGCTTCGGTGGCGGAAGCGGAAATTGA
PROTEIN sequence
Length: 260
VTAAFSTSLARDQKMVSPKSNAPRSVRPRFSKPMLIAPVLALISAVSGCAGSPDGMATSAIRDDYRQRHPIVLTEKEHSVDIPVAVSDRHLTTGMRDMVRGFVQDYRAHASGTVEILSPRQSENALAASALNSQIRRELVTSGIPSGRIVNTYYAANGPGDAAPIRLRFSATTAATNACGQWPDDLADNAFDNQNYYNFGCATQQNLAAQVANPTDLISPRAMTPIDADQRSKVINDYRTGATPTSTASVGGFGGGSGN*