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SCNpilot_expt_1000_bf_scaffold_4392_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(4054..4338)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG69_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 146
  • Evalue 1.00e-32
cpaB; pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 146
  • Evalue 3.30e-33
Pilus assembly protein CpaB {ECO:0000313|EMBL:AGB69686.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 146
  • Evalue 1.50e-32

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAAACCCGCTCGCATAATGATACTCGCAGTGGCAGCCATCGCGGCCGGGATGGCCGGTCTGCTCGCGATGCGTCTTGCGGGGTCGCTCAATATTGTTCCCCAGCAGATTGCAGCGGTGGTGGAGAAGGAGGCGACGGTCAATGTCCTCGTTGCCGGTGCGAATCTGCCCGTTGGCTCGCGTTTGGGCGCACAATCAATTCATTGGATGCCCTGGCCGGAAAGCGGCATCGTAAATGGCTTCATCACCGCTTCATCACCGAGCGCCAGCGGCCCGATGCGCTGA
PROTEIN sequence
Length: 95
MKPARIMILAVAAIAAGMAGLLAMRLAGSLNIVPQQIAAVVEKEATVNVLVAGANLPVGSRLGAQSIHWMPWPESGIVNGFITASSPSASGPMR*