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SCNpilot_expt_1000_bf_scaffold_4392_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(5108..5290)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein, pilin Flp n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TVY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 60.0
  • Bit_score: 98
  • Evalue 2.70e-18
Flp pilus assembly protein, pilin Flp {ECO:0000313|EMBL:ENN84569.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 60.0
  • Bit_score: 98
  • Evalue 3.80e-18
pilA; component of type IV pilus; K02651 pilus assembly protein Flp/PilA similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 60.0
  • Bit_score: 93
  • Evalue 2.80e-17

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGTCCAAGCTTTTTTCGCGCTTCCTGAAGGATGAGTCGGGCGCAACGGCAATCGAATACGGTCTGATCGCCGCTCTGATCTCGGTTGCCATCATCACCGGCGCAACCACCCTGGGCACCTCGCTCAGCACTACCTTCAACAACATCTCGAACAAGATGACCAACGCACAGGCCAAGTACTAA
PROTEIN sequence
Length: 61
MSKLFSRFLKDESGATAIEYGLIAALISVAIITGATTLGTSLSTTFNNISNKMTNAQAKY*