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SCNpilot_expt_1000_bf_scaffold_8226_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(5218..5967)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TX76_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 249.0
  • Bit_score: 517
  • Evalue 7.70e-144
  • rbh
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:ENN85014.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 249.0
  • Bit_score: 517
  • Evalue 1.10e-143
pcaH; protocatechuate 3,4-dioxygenase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 249.0
  • Bit_score: 514
  • Evalue 2.10e-143
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGTCCGATAGAAGCAACAGCAAGCCCGAGACGGGCGCCTTTTTTGCGAGAGATCGAGCCTGGCATCCGCCGGCCTTTGCGCCGGGCTACAAGACCTCGGTCCTGCGGTCCCCACAGCGGGCATTGCTCTCGCTCGACGGCACGATCTCCGAGATCACTGGACCGGTGTTCGGCCATTCCATATTGAACGAGCTCGACAACGACCTGATCCACAATTTCGCCAAGCCCGGTGAAAGCGCCATCGGCGAGCGGATCATCGTGCATGGCCGCGTGCTCGACGAGCGCGGACGGCCTGTTCCGGGTGCCCTGCTCGAATTCTGGCAGGCCAATGCCGGCGGGCGTTACCGCCACAAGAAGGAAACCTATCTGGCCGCCATCGACCCGAATTTCGGCGGCTGCGGCCGCGCCATCACCGATGACGGAGGGCATTACGCTTTCCGTACCGTCCGTCCCGGCGCCTATCCCTGGCCGAACGGCGTCAACGACTGGCGGCCGGCTCATATTCACTTCTCCGTCTTCGGCCATGGCTTTGCGCAGCGGCTGATTACGCAGATGTATTTCGAGGGTGACCCGATGATCTGGAAATGTCCGATCGTCGGCACGATCCCCGACAGAGAGGCGATCGAGCAGCTGATTGCGCCGCTCGATTGGGGCAATACGATCCCGATGGATGCCCGCGCCTATAAATTCGATATCGTGTTGCGCGGTCGCCGTTCGACCCTGTTCGAAAACCGGCTGGAGGGCAATTGA
PROTEIN sequence
Length: 250
MSDRSNSKPETGAFFARDRAWHPPAFAPGYKTSVLRSPQRALLSLDGTISEITGPVFGHSILNELDNDLIHNFAKPGESAIGERIIVHGRVLDERGRPVPGALLEFWQANAGGRYRHKKETYLAAIDPNFGGCGRAITDDGGHYAFRTVRPGAYPWPNGVNDWRPAHIHFSVFGHGFAQRLITQMYFEGDPMIWKCPIVGTIPDREAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRSTLFENRLEGN*