ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1265_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 2603..3217

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000371ED45 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 190.0
  • Bit_score: 240
  • Evalue 1.10e-60
OstA family protein {ECO:0000313|EMBL:AJP70827.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 182.0
  • Bit_score: 240
  • Evalue 1.60e-60
OstA family protein; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 187.0
  • Bit_score: 171
  • Evalue 3.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGATCCGTGCGACCGCCCTGCTTCCGATCGGCTTCTCGCTGGCGCTCGCCGTGTCCGCTGCCCCCGCGGCCGCGCAGCAGCGCCACGACAGCAACGCGCCGATCGACTTCAATGCCCAGCACATGGAGCTGCAGGACAAGGCCAATCGCGTGCTGTTCAGCGGCAGCGTGCAGATCCGGCAGGCCGAGATGATGCTCGAGGCGGCACGCGTCACCGTCGCCTATACCGGCCAGATCACCGACGGCTCGCCCGAAGTCTCGCGGCTCGACGCGGCCGGCGGCGTCACCGTCACTCGGCCCGATCAGCGCGCGACCGGCCAGTTCGCGGTGTACGACGTCAACAAGCGGATCATCACCATGGTCGGCGGCGTCACGCTCAAGCAGGGGGCCAACACCGTCTCGGGCGGCCGCCTGGTGATCAACCTCGACACCGGCCGCGCGACGATCGACGGTTCGGGCGTAGGCGGCTCGACCGCCGTGCCGGGCACGCCCGGGGTGCAGAGCCGCGGTGGCCGCGTAACCGGCCGCTTCTCGGTGCCCAAGCGCGCGAACGCGCCGGCAGCCACGCCGACGCCGGCCCCGGCGCCCGCGGCAACGCCGGCTCCGAAACCGTAA
PROTEIN sequence
Length: 205
MIRATALLPIGFSLALAVSAAPAAAQQRHDSNAPIDFNAQHMELQDKANRVLFSGSVQIRQAEMMLEAARVTVAYTGQITDGSPEVSRLDAAGGVTVTRPDQRATGQFAVYDVNKRIITMVGGVTLKQGANTVSGGRLVINLDTGRATIDGSGVGGSTAVPGTPGVQSRGGRVTGRFSVPKRANAPAATPTPAPAPAATPAPKP*