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SCNpilot_expt_1000_bf_scaffold_1265_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 3328..4119

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 239.0
  • Bit_score: 394
  • Evalue 2.50e-107
ABC transporter ATP-binding protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030C2CD3 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 260.0
  • Bit_score: 450
  • Evalue 9.40e-124
  • rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJP70826.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 258.0
  • Bit_score: 468
  • Evalue 6.10e-129

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCAGGGACCGAGTATGACCGAAGTCGCCACTCTCGAAACCCCCGTCGCGGACCCAGCGCCGCTGCCCGACAAGGGGCTCGCGGTCGTCTCGATCGCCAAGTCCTACGACAAGCGCGTGGTGCTGACCGACGTATCGGTTTCGGTCGGCCGCGGCGAAGTGGTCGGCCTGCTCGGGCCCAATGGCGCGGGCAAGACCACCTGCTTCTATTCGGTGATGGGGCTGGTGAAGCCCGACAGCGGCCGCATCATGCTGGACGGCGAGGACATCACGCGCCTGCCCATGTATCGCCGCGCGATCCTGGGCCTGGGCTATCTCCCCCAGGAGACTTCGATCTTCCGCGGACTGACGGTGGAGGGCAACATCCTCGCCGTGCTTGAGCTGTCCGAGCCCGACAAGGACGCGCGCAAGCGCCGGCTCGACGAGCTGCTCGACGAATTCGGCCTCACGCGCCTGCGCGCCGCGCCGGCCATGGCGCTGTCGGGCGGCGAGCGCCGCCGCGCCGAGATCGCCCGCGCCCTGGCGGCGGACCCGACGATCATCCTGCTCGACGAGCCGTTCGCCGGCATCGACCCGATCTCGATCTCCGACATCCGCGACCTGATCATCCAGCTCAAGCAGCGCGGCATCGGCGTGCTGATCACCGATCACAATGTCCGCGAGACGCTCGACATCGTCGATCGCGGCTACATCATCTATGACGGCCGCGTGCTGTTCGCCGGGGCGCCCGCCGATCTCGTCAAGGACGAGAATGTCCGCCGCCTCTATCTCGGCGAGAGCTTCGAGCTGTGA
PROTEIN sequence
Length: 264
MQGPSMTEVATLETPVADPAPLPDKGLAVVSIAKSYDKRVVLTDVSVSVGRGEVVGLLGPNGAGKTTCFYSVMGLVKPDSGRIMLDGEDITRLPMYRRAILGLGYLPQETSIFRGLTVEGNILAVLELSEPDKDARKRRLDELLDEFGLTRLRAAPAMALSGGERRRAEIARALAADPTIILLDEPFAGIDPISISDIRDLIIQLKQRGIGVLITDHNVRETLDIVDRGYIIYDGRVLFAGAPADLVKDENVRRLYLGESFEL*