ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1265_20

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 18805..19713

Top 3 Functional Annotations

Value Algorithm Source
lysine decarboxylase n=1 Tax=Sphingomonas elodea RepID=UPI0002630A57 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 287.0
  • Bit_score: 523
  • Evalue 1.70e-145
  • rbh
Lysine decarboxylase {ECO:0000313|EMBL:AJP70816.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 288.0
  • Bit_score: 510
  • Evalue 1.60e-141
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 287.0
  • Bit_score: 419
  • Evalue 1.10e-114
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGAGCGATACGAGAGTTCCGAGCCGCGTTTTCCGCCCTGCCCAGCAGGAAGTGCAGAACGCCAACACCGCCACCGGCACACCGCAGACCGAGCACCCCGCCTACCGCCTCGCCTTCCAGGACATGGACTTCCTGCTGCGCGAGGACCTGCGGCCGGTGCGCTTCCAGCTCGAATTGCTGAAGCCGCAGCTGCTGCTCGACGAGGCGCACATCAAGTCCACCTTCGTCGTCTACGGATCGGCCCGCATCCCCGAGCCGAGCAAGGCGAGCGCATTGCTCGCGCTGGCCGAGACCGAGCAGCAGAAGAAGATCGCCGAGCGGCTGGTCGAGAAGTCGAAATATTACGAGGTCGCGCGCGCGCTTGCCCAGCTCGCCTCCAACTTCCCGCTCGACGAGGCGGGGAACCGCCACTTCGTCGTCACCTCGGGCGGCGGCCCGTCGATCATGGAAGCGGCGAACCGCGGCGCGCGCGACGTGGGGGCGGACACGATCGGCCTCAACATCCTGCTGCCCCATGAGCAGGCCCCGAACCCCTATGTCACGCCGGGCCTGTCGATGCAGTTCCACTATTTCGCGCTCAGGAAGATGCACTTCCTGCTGCACGCGCGCGCGGTGGCGGTGTTCCCCGGCGGCTTCGGCACGTTCGACGAATCGTTCGAGCTGCTGACGCTGATCCAGACCGGCAAGATCGCGCCGATCCCGGTGCTGTTCTACGGCAAGGACTTCTGGAACCGCGTCGTCGATTTCGAGGCGCTGGTCGAGGAAGGGGTGATCTCGCCCAAGGATCTCGACCTGTTCCATTTCTGCGAGACCGCGGAGGAGGGCTGGCAGATCGTCCAGGACTTCTGGAAGGGCAAGGACCACACGGTGATCGCCCGCCCGCGGCCGGGAATCGACAAGCCGGAGTGA
PROTEIN sequence
Length: 303
MSDTRVPSRVFRPAQQEVQNANTATGTPQTEHPAYRLAFQDMDFLLREDLRPVRFQLELLKPQLLLDEAHIKSTFVVYGSARIPEPSKASALLALAETEQQKKIAERLVEKSKYYEVARALAQLASNFPLDEAGNRHFVVTSGGGPSIMEAANRGARDVGADTIGLNILLPHEQAPNPYVTPGLSMQFHYFALRKMHFLLHARAVAVFPGGFGTFDESFELLTLIQTGKIAPIPVLFYGKDFWNRVVDFEALVEEGVISPKDLDLFHFCETAEEGWQIVQDFWKGKDHTVIARPRPGIDKPE*