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SCNpilot_expt_1000_bf_scaffold_1265_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(19727..20218)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5A1AE related cluster n=1 Tax=unknown RepID=UPI0003D5A1AE similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 153.0
  • Bit_score: 129
  • Evalue 3.00e-27
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:ETI65424.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 153.0
  • Bit_score: 129
  • Evalue 4.20e-27
outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 157.0
  • Bit_score: 123
  • Evalue 8.70e-26

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAAGTTCGCTGCGTATCGCCCCGCGCTCGCGCTGTTGGCCCTGTTGCTGGCCGGTTGCCAGGCGTCGATGCACCCCAAGCCGCTGTGGACCGCTCCCCAGCTCGAAGTGATGCGGGCCGCCGGCTTCGTGCAGACCGATCGCGGCTGGGAGCTCAGCGTCGCCGATCGGCTGCTCTTCGCTTCCGACGAGAGCCGCGTCGACGAGAAGCAGGCCGTGGCGATCGCGCGCATCGCGAGCAACCTGCAGGCGGTCGATATCCGCCACGCCACGATCGAGGGCCATGCCGACATCACCGGCACGCGCCGCCACAACCTGATCCTGTCGGGCCAGCGCGCCCGGGCCGTCGCCAGCGTGTTCGTCGGCGCGGGCTTCGATCGCGGCAACATCCGCACCGAGGGGCTGGGCGACCGCTATCCGATCGAGGACAATCGCACCGCCGAGGGGCGGCAGGAGAATCGCCGCGTGGTGATCCTCCTCAGCGCGCCCTGA
PROTEIN sequence
Length: 164
MKFAAYRPALALLALLLAGCQASMHPKPLWTAPQLEVMRAAGFVQTDRGWELSVADRLLFASDESRVDEKQAVAIARIASNLQAVDIRHATIEGHADITGTRRHNLILSGQRARAVASVFVGAGFDRGNIRTEGLGDRYPIEDNRTAEGRQENRRVVILLSAP*