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SCNpilot_expt_1000_bf_scaffold_1356_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 8300..10096

Top 3 Functional Annotations

Value Algorithm Source
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 598.0
  • Bit_score: 1015
  • Evalue 8.90e-294
succinate dehydrogenase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B70820 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 598.0
  • Bit_score: 1105
  • Evalue 0.0
  • rbh
Fumarate reductase {ECO:0000313|EMBL:AJP73821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 598.0
  • Bit_score: 1119
  • Evalue 0.0

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGTCCGCGTACAAGATCATCGATCACACCTATGACGCGGTGGTGGTCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGGCCTCAAGACCGCCTGCATCACCAAGGTGTTCCCGACCCGCAGCCACACCGTGGCGGCGCAGGGCGGCATCGCCGCGAGCCTGGGCAACAACACGCCCGACCACTGGTCGTGGCACATGTTCGACACCGTCAAGGGCTCGGACTGGCTCGGCGACCAGGATGCGATCGAATATATGGTCCGCGAGGCGCCCGCCGCGGTCTATGAGCTCGAGCATGCCGGCGTGCCGTTCAGCCGCAACGACAACGGCACGATCTACCAGCGCCCGTTCGGCGGCCATATGCAGAACATGGGCGAAGGCCCTCCCGTGCAGCGCACTTGCGCGGCGGCCGATCGCACCGGCCACGCCATGCTCCACGCGCTCTACCAGCAGAGCCTGAAATACGACGCGGACTTCTACGTCGAATATTTCGCGCTCGACCTGATCATGGAGAACGGCGCCTGCCGCGGCGTGATCGCGCTGTGCATGGAAGACGGCTCGATCCACCGCTTCCGCAGCCATGCCGTCGTCCTCGCGACGGGCGGCGGCGGCCGGGTCTACCAGTCGGCGACGTCGGCGCACACCTGCACCGGCGACGGCAACGGCATGGCGCTGCGCGCCGGCATCGCGCTGCAGGACATGGAGTTCGTCCAGTTCCACCCGACCGGCATCTACGGCGCCGGCGTGCTGATCACCGAGGGCGCGCGCGGCGAGGGCGGCTACCTCACCAACTCCGAGGGCGAGCGCTTCATGGAGCGCTATGCCCCTTCGGCCAAGGACCTTGCCAGCCGCGACGTGGTCGCGCGCTCGATGGCGATGGAGATCCGCGAGGGCCGCGGCGTCGGCAAGGAGAAGGATCACATCTTCCTTCACCTCAACCACATCGATCCGAAGATCCTGCACGAGCGCCTGCCGGGCATCACCGAGACCGGCAAGATCTTCGCCGGCGTCGACCTGACCCGCCAGCCGCTGCCGGTGGTGCCGACCGTGCACTATAACATGGGCGGCATCCCGACCAATTATCACGGCGAAGTCGTCCACAACAAGGACGGCGATCCGGATGCCGTGATCCCCGGCCTGTTCGCGGTCGGCGAAGCGGCCTGCGTGTCGGTGCACGGCGCCAACCGCCTGGGCTCCAACTCGCTGATCGACCTGGTCGTGTTCGGCCGCGCCACGGGCCTGCGCCTCAAGGAGCTGCTCAAGCCCGGCATGAAGCACAACGAGCTGCCCAAGGGCTCGGAGGAGTTCGCGCTCGGCCGCCTCGATCACTTCCGGAACGCCAAGGGTTCGCGCCCGACCGCGGAGGTCCGCGCCGACATGCAGAAGACGATGCAGCGCCACTGCGCCGTGTTCCGCGACAGCGCGCTGCTCGCCGAGGGCGTCGGCCACATGCAGGAAGTGTACAAGGGCTTCCAGGACGTGGGCATCCAGGACCGCTCGCTGATCTGGAACACCGACCTGGTGGAGACGCTGGAGCTCGACAACCTGATCGGCCAGGCCGTCGTCACCATCGAGTGCGCCGCCAACCGCAAGGAAAGCCGCGGCGCGCACATGCACGAGGACTTCCCCGAGCGCGACGACAAGAACTGGATGAAGCACACCGTCGCCACCTTCGAAGGCTGGGGCGGCAAGGGCGGAAAGACCGAGATCGATTACCGCCCGGTCCACGACTACACGCTCACCGACGAGATCGAGTACATCAAGCCGAAGAAGCGGGTGTATTGA
PROTEIN sequence
Length: 599
MSAYKIIDHTYDAVVVGXXXXXXXXXXXXXAGLKTACITKVFPTRSHTVAAQGGIAASLGNNTPDHWSWHMFDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNDNGTIYQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYVEYFALDLIMENGACRGVIALCMEDGSIHRFRSHAVVLATGGGGRVYQSATSAHTCTGDGNGMALRAGIALQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVARSMAMEIREGRGVGKEKDHIFLHLNHIDPKILHERLPGITETGKIFAGVDLTRQPLPVVPTVHYNMGGIPTNYHGEVVHNKDGDPDAVIPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGLRLKELLKPGMKHNELPKGSEEFALGRLDHFRNAKGSRPTAEVRADMQKTMQRHCAVFRDSALLAEGVGHMQEVYKGFQDVGIQDRSLIWNTDLVETLELDNLIGQAVVTIECAANRKESRGAHMHEDFPERDDKNWMKHTVATFEGWGGKGGKTEIDYRPVHDYTLTDEIEYIKPKKRVY*