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SCNpilot_expt_1000_bf_scaffold_1803_14

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 12729..13895

Top 3 Functional Annotations

Value Algorithm Source
ligA; NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 377.0
  • Bit_score: 592
  • Evalue 1.20e-166
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 377.0
  • Bit_score: 592
  • Evalue 5.40e-166
NAD-dependent DNA ligase LigA n=1 Tax=Sphingomonas elodea RepID=UPI00026316BF similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 381.0
  • Bit_score: 663
  • Evalue 1.80e-187

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
TTGTGGNNNNNNNNNNNNNNNNCCGAGCGCGCCCAGACCCTATTGCGCGGCATCGACATCCAGGTCGGCCGCACCGGCAAGCTCACGCCGGTCGCCCGGCTGGAGCCGGTTACCGTCGGCGGCGTCGTCGTCACCAACGCGACGCTGCACAATGCCGACGAGATCGCGCGCCTGGGCGTGCGCCCGGGCGACCGGGTCGTGCTCCAGCGCGCCGGCGACGTGATCCCGCAGATCGTCGAGAACCTGACCCGCGACGAGGACCGGCCGGCATTCCTGTTCCCCAGCCATTGCCCGATCTGCCATTCGGAAGCCGTGGCCGAGGAAGGCGAAGTCGACATACGCTGCACGGGCGGGCTGATCTGCCCGGCCCAGCGGCTCGAGCGCCTCAAGCACTTCGTCAGCCGCGGCGCGCTCGACATCGAGGGGCTGGGCGAGAAGACCCTGATCGAGCTGCTCGACCTGGGCTGGATCGTCGAGCCGGCGGACATCTTCCGCCTCGCCCCCCATCGCGCCGAACTGCTGGGCCGCGAAGGCTGGCAGGAGAAGTCGGTCGACGCGCTGCTCGCCGCGATCGAAGCCAAGCGCGCACCCGATGCGGCGCGGCTGCTCTTCGGCCTGGGCATCCGCCATATCGGGGCGATCACGGCACGAGACCTTTTGAAACGCTATGCAACATTGCCGGCGCTCCAGGCGCTCGCCGACGAGGTCATCGCGCTGCGCGATGCAACGCCGCCACAGATCGGTGAGACCGAGACGAAACACCGTGCGCGGCTCGACAAGGCGATCGCCGAGCATATCGGAGTCGAGAATGTCGGCGGCGCCGTCGGCCAGGCCCTGGCCGATTTCTTCCACGAGCCGCACAATCGCGCGGTGTGGGAAGACCTTCTGGGCGAAGTCGCCCCGCCGCCCTTCATCGTCGAGACACGCGAATCGGAAGTATCGGGAAAGACGCTGGTTTTCACCGGCACGCTGGAGGCGCTGAGTCGCGACGAGGCCAAGGCTCAGGCCGAATCGCTGGGTGCGCGAGTCGCGGGATCGGTGTCCGCGAAGACCGATCTGGTGATTGCGGGCCCCGGCGCGGGTTCGAAGCTGAAAAAGGCCGCAGAACTCGGAATCCGCGTAATTTCGGAGAGCGAATGGTTGCAGATCGTCGCCATAGTGGAGTGA
PROTEIN sequence
Length: 389
LWXXXXXXERAQTLLRGIDIQVGRTGKLTPVARLEPVTVGGVVVTNATLHNADEIARLGVRPGDRVVLQRAGDVIPQIVENLTRDEDRPAFLFPSHCPICHSEAVAEEGEVDIRCTGGLICPAQRLERLKHFVSRGALDIEGLGEKTLIELLDLGWIVEPADIFRLAPHRAELLGREGWQEKSVDALLAAIEAKRAPDAARLLFGLGIRHIGAITARDLLKRYATLPALQALADEVIALRDATPPQIGETETKHRARLDKAIAEHIGVENVGGAVGQALADFFHEPHNRAVWEDLLGEVAPPPFIVETRESEVSGKTLVFTGTLEALSRDEAKAQAESLGARVAGSVSAKTDLVIAGPGAGSKLKKAAELGIRVISESEWLQIVAIVE*