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SCNpilot_expt_1000_bf_scaffold_2124_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 8740..9114

Top 3 Functional Annotations

Value Algorithm Source
response regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631E52 similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 124.0
  • Bit_score: 224
  • Evalue 6.80e-56
Response regulator {ECO:0000313|EMBL:AJP74568.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 124.0
  • Bit_score: 228
  • Evalue 3.80e-57
response regulator receiver protein; K13589 two-component system, cell cycle response regulator CpdR similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 122.0
  • Bit_score: 187
  • Evalue 2.20e-45

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGATCCGGATTCTGCTGGCCGAGGATGACCGCGTGATGCGGGAATACCTTACCCGGGCGCTCGAGCGTTCGGGCTATGCGGTCAGCGCGGTCGATCGCGGCACCGCGGCGATACCGCTGCTCGAGAACGAGCGCTTCGACCTGCTGCTAACCGATATCGTGATGCCCGAGATGGACGGCATCGAGCTGGCCCAGAAGGCGAGCGAGATCGCGCCGGACATGCGGGTGATGTTCATCACCGGCTTCGCGGCGGTGACGCTCAAGGCCGGCAAGCAGGTGCCCCAGGCGCGGGTGCTCTCCAAGCCCTTCCATCTGCGCGACCTGGTGCTCGAGGTGGATCGGCTGTTCGAAGCGGAGAATGCCGGGTTCAATTGA
PROTEIN sequence
Length: 125
MIRILLAEDDRVMREYLTRALERSGYAVSAVDRGTAAIPLLENERFDLLLTDIVMPEMDGIELAQKASEIAPDMRVMFITGFAAVTLKAGKQVPQARVLSKPFHLRDLVLEVDRLFEAENAGFN*