ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2317_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 9671..10300

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 209.0
  • Bit_score: 367
  • Evalue 1.20e-98
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 197.0
  • Bit_score: 316
  • Evalue 9.00e-84
  • rbh
isopropylmalate isomerase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FD2938 similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 209.0
  • Bit_score: 364
  • Evalue 9.20e-98
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGGAAGCCGTTCGCAAGGTCGAAGGGCGCGCCTATCCATGGGGCGCGAGCAATATCGACACCGACATCATCATCCCGGCGCACTGGCTGAAGACCACCACGCGCGAGGGGCTGGGCAAGGGCGCCTTCGAGAGCGTGCGCGCCCAGCCGGGCAATGTCTTCGACGATCCGCGCTATGCGGGCGCGCCCGTGCTCGTCGCCGGCGACAATTTCGGCTGCGGATCGAGCCGCGAGCATGCCGCCTGGGCGCTCGCCGATCTCGGCATCAAGGCCGTGATCGCGCCGAGCTTCTCGGACATCTTCTCGGGTAACGCCTTCAAGAACGGCATCGTGCCGGTGGTGCTGCCGCAGGAAGCGGTGGACCGGCTGGTCGAGGTCGCCAGGACCGACGAGGTCACCGTCGACCTGGAGACGATGACCGTCACCACTCCCTATCAGGATCGCTTCGCCTTCGATCTCGACCCGTTTCGCCGCCAATGCCTGATGGAAGGGCTGGACGAGATCGGCATGACGCTGGCACAAGATACCGCGATTTCGAAATTCGAAGCCGGGATGGCAAAGGATCGCCCCTGGCTCGCGGTGGAGACGGCGAATGAAGGCATTGCTTTCGAAGCAACCGGGCGGACCTGA
PROTEIN sequence
Length: 210
VEAVRKVEGRAYPWGASNIDTDIIIPAHWLKTTTREGLGKGAFESVRAQPGNVFDDPRYAGAPVLVAGDNFGCGSSREHAAWALADLGIKAVIAPSFSDIFSGNAFKNGIVPVVLPQEAVDRLVEVARTDEVTVDLETMTVTTPYQDRFAFDLDPFRRQCLMEGLDEIGMTLAQDTAISKFEAGMAKDRPWLAVETANEGIAFEATGRT*