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SCNpilot_expt_1000_bf_scaffold_2758_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(2..289)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B51E20 similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 61
  • Evalue 5.80e-07
Transcriptional regulatory protein TdiR {ECO:0000313|EMBL:GAO32558.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 75.0
  • Bit_score: 61
  • Evalue 6.20e-07
fixJ; response regulator FixJ; K14987 two-component system, LuxR family, response regulator FixJ similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 75.0
  • Bit_score: 60
  • Evalue 3.10e-07

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Taxonomy

Ferriphaselus amnicola → Ferriphaselus → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
GTGGATTGTGCAGAGGGCAAGAGGGCATCGGCCTGTGAGGCTGATGGGAACGGGGAACTGCCCGTCTGTATCATAGACGATGATGTCGGCATGCGAGAGGCCATTCGTATCCTGCTTGCACCATTGGGATACAGGGTCGAACTCTTCGATTGCGCGAACTGCTACCTCATGGCCAATGACAAGCCGCAGGGTGTCGTTATCCTCGACATGCGGCTGCCGGGGATGAGTGGCCTCAAGCTGCTTGAGCGATGGAATCTGCCGCGATCCGGGTTCGAAGTGGTCTTCATC
PROTEIN sequence
Length: 96
VDCAEGKRASACEADGNGELPVCIIDDDVGMREAIRILLAPLGYRVELFDCANCYLMANDKPQGVVILDMRLPGMSGLKLLERWNLPRSGFEVVFI