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SCNpilot_expt_1000_bf_scaffold_2519_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 16809..17222

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MIS0_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 94.0
  • Bit_score: 83
  • Evalue 1.60e-13
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ELS27451.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 94.0
  • Bit_score: 83
  • Evalue 2.20e-13
putative AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 94.0
  • Bit_score: 80
  • Evalue 4.20e-13

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGACTTCGGGGCGTGCGGCCATGTTGATGGACTATGTCCCGGTCGCCCTGGAAGTTGGCCTCGATCCCTATCGCATTCTTGCCGACATCGGCGTCAGCCCGTCGCAGCTCCGCAACCCCGAGGAACGGCTTCCCCGCGGCGTGATCGCCTCGATCCTCGAGCGCTCGGCCATGGAAGCGAACTGCCCGCACTTCGCAATGCTGATCGCCGAGCGGCGCGACCTATCCTCGCTCGGCCCGTTGAGCCTCGCCCTCCAGCAGCAGGAGACGCAGCACGACGCCGTCCGCACGCTGCCGCTACCAGCATCTGCTGAGCGACCTGCTCACCTTCAGCCTCGAGATCGAGGGCGACGCTGCGCTGGTGCGGACCCAGATCGTCAGCAACATCGATTTCGCGCCGCGCCAGGCCCATGA
PROTEIN sequence
Length: 138
MTSGRAAMLMDYVPVALEVGLDPYRILADIGVSPSQLRNPEERLPRGVIASILERSAMEANCPHFAMLIAERRDLSSLGPLSLALQQQETQHDAVRTLPLPASAERPAHLQPRDRGRRCAGADPDRQQHRFRAAPGP*