ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2938_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(19327..20022)

Top 3 Functional Annotations

Value Algorithm Source
permease n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCACF similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 193.0
  • Bit_score: 294
  • Evalue 9.90e-77
DNA, contig: SP627 {ECO:0000313|EMBL:GAN13787.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 203.0
  • Bit_score: 280
  • Evalue 2.10e-72
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 194.0
  • Bit_score: 255
  • Evalue 1.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
GTGGCTGCCGATCGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTGCAGACCACGCTCGCCAATGCGACGCTGTTCGGCAATTCGGCGACGCTGATGTACCCGATCTACGGCTTCGTCGTCGCGCGCATGTGGCCGACGCGGACCCAGGGGATCGCGCTGGCGCTCGCCGCGGCCGGGGCGGGGCTGCTGCTCGGCCGCTCCTATCAGCTCTCGCCCGATCATCTGGTCGGCGACCTGCTCTGCCTGCTCGCGGGCACGCTCTACACCGTCTATTTCGTGCTGATGGGCAAGGCGCGCGAAGCGATGGCGCCGCTTCCGGCGCTCGCGCTGTCCACGCTGGCCAGCCTGCTGCCTCTCCTGCTCGCCGCGCTGCTGTTCGGCGAGAAATTCTGGCCGGAGCATTGGGGCGTGCTGATCGGCCTCGCGCTGGCGAGCCAGGTCGTGGGGCAGGGGCTGATGATCTACGCGATCGGCCTTCTCCCGCCCCTCGTCGTCGGCATCGCCCTGCTCACCCAGCCGATCGTCGCGGGGGCGGTGGGCTGGATCGTCTATGGCGAGCGGCTCGGCCTCGCCGATTTCATCGGCGCGGTGCTGGTCGCGATCGCATTGGTGCTGGTGCGCGGCGGCGGCACGCGGGTTGCGCCGGAAGCTGAGGGGACTAAACCGGCATGA
PROTEIN sequence
Length: 232
VAADRPXXXXXXXXXXXXXXXILQTTLANATLFGNSATLMYPIYGFVVARMWPTRTQGIALALAAAGAGLLLGRSYQLSPDHLVGDLLCLLAGTLYTVYFVLMGKAREAMAPLPALALSTLASLLPLLLAALLFGEKFWPEHWGVLIGLALASQVVGQGLMIYAIGLLPPLVVGIALLTQPIVAGAVGWIVYGERLGLADFIGAVLVAIALVLVRGGGTRVAPEAEGTKPA*