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SCNpilot_expt_1000_bf_scaffold_2780_9

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 11202..11597

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289D1C8 similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 127.0
  • Bit_score: 202
  • Evalue 2.20e-49
Multidrug transporter MatE {ECO:0000313|EMBL:AJP71526.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 132.0
  • Bit_score: 204
  • Evalue 8.20e-50
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 126.0
  • Bit_score: 188
  • Evalue 1.00e-45

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCCGGTCCCCCCCAACGCCACGACCTGACCCAGGGCCCGATCAGCCGGACGCTGCTGCTGTTCGCGCTGCCCACGCTCGGCTCGAACATCCTCCAGTCGCTCAACGGCTCGATCAACTCGATCTGGGTCGGCCGCTTCCTTGGGGAACAGGCGCTGGCGGCAACGGCCAACGCCAACATCATCATGTTCCTGATGTTCTCGGCAGTATTCGGCTTCGGCATGGCGGCGACCATCCTGATCGGCCAGTCGATGGGCCGGCGCGACGTCGAGGCGGCGCGGCGCGCCTTCGGCTCGGCGATCGGGCTGGTGATGGGCGGCGCCGTGGTGATCGCCATCCTGGGCTGGCTGTTCGCCCCGCAGATCCTCCGCCTGCTCGCCACCCCCGGCGAGGCG
PROTEIN sequence
Length: 132
MAGPPQRHDLTQGPISRTLLLFALPTLGSNILQSLNGSINSIWVGRFLGEQALAATANANIIMFLMFSAVFGFGMAATILIGQSMGRRDVEAARRAFGSAIGLVMGGAVVIAILGWLFAPQILRLLATPGEA