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SCNpilot_expt_1000_bf_scaffold_2875_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(5423..7135)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Sphingomonas elodea RepID=UPI0002631E5C similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 570.0
  • Bit_score: 1056
  • Evalue 0.0
  • rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111, ECO:0000313|EMBL:AJP70990.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 573.0
  • Bit_score: 1045
  • Evalue 0.0
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 569.0
  • Bit_score: 995
  • Evalue 6.90e-288

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCCACTACGGCAAATCCGAGCCGCGACGATTTCGCGGCGCTTCTCGAACAGACTCTCGGTCAGGCTGACGGCTTCGAAGGCCGCGTCGTGATCGGCACCGTCACCGGCATCGAGAACGACCTCGCGGTCATCGACGTCGGCCTCAAGTCCGAAGGCCGCGTGCCGCTGCGCGAATTCGCCGCGCCGGGCCAGAAGGCCGATCTGAAGGTCGGCGACGAAGTCGAAGTCTATGTCGACCGCGTCGAGAACAGCAACGGCGAAGCCATGCTGTCGCGCGATCGCGCTCGCCGCGAAGCCGCCTGGGACAAGCTCGAAGCCGAGTTCACCGAGAGCGCCCGCGTCGAAGGCGTCATCTTCGGCCGCGTCAAGGGCGGCTTCACCGTCGACCTTTCGGGCGCGGTGGCCTTCCTCCCCGGCTCGCAGGTCGACATCCGCCCGGTGCGCGACGTCACCCCGCTGATGGACATCCCGCAGCCCTTCCAGATCCTCAAGATGGACCGCAAGCGCGGCAACATCGTCGTGTCGCGCCGCGCCGTGCTCGAAGAGACCCGCGCCGAGCAGCGTTCGGGCCTCATCCAGAGCCTGGCCGAGGGCCAGATCATCGACGGCGTCGTCAAGAACATCACCGATTACGGTGCGTTCGTCGACCTGGGCGGCATCGACGGCCTGCTGCACGTCACCGATCTGAGCTACAAGCGCGTCAACCACCCGTCCGAGATGCTCAACATCGGCGACACGGTCCGCGTCCAGATCATCCGCATCAACCGCGACACCCAGCGCATCTCGCTCGGCATGAAGCAGCTCGAGAGCGATCCGTGGGATGGCGCCGCGGTGAAGTATCCGGTCGGCGCGAAGCTGTCGGGCCGCGTGACCAACATCACCGAATATGGTGCGTTCGTCGAGCTCGAGCCGGGCATCGAGGGCCTGGTCCACGTCTCGGAGATGAGCTGGACCAAGAAGAACGTGCACCCGGGCAAGATCGTCTCGACCTCGCAGGAAGTCGAAGTCGTGGTGCTCGAGGTGGACGCCGAGAAGCGCCGCATCTCGCTCGGCCTCAAGCAGGCCCAGCAGAACCCGTGGGAGAAGTTCGCGGCCGAGCACCCGGTCGGCACCGAGGTCGAGGGCGAAGTCAAGAACGCCACCGAGTTCGGCCTGTTCATCGGCCTGGACAACGACGTCGACGGCATGGTCCACATGTCGGACATCGCCTGGGGCATCTCGGGTGAGGACGCGCTCAACCTGCACCGCAAGGGCGAAGTGGTTAAGGCCATCGTGCTCGCCGTGGAGTCGGACAAGGAGCGCATCTCGCTCGGCATGAAGCAGCTCGAGCGTGGCGGCGTCGCCGCTGCGGGTTCGACCACTTCGGCCGATCGCCTGAACAAGAACCAAGTCGTCACCGTGACCATCCTCGAAGTCCGCGACGCGGGCCTCGAAGTGCAGGTTGGCGAAGACGGCGCGACCGGCTTCATCAAGCGCACCGACCTCGGCCGCGACCGCGACGAGCAGCGTCCGGAGCGTTTCCAGGTCGGCCAGAAGCTCGATGCGATGGTCACCGGCTTCGACCGTTCGAAGAAGCCGACCTTCTCGGTCAAGGCGATGCAGATCGCCGAGGAGAAGCAGGCGGTGGCGCAGTATGGCTCGTCCGATTCGGGCGCGTCGCTGGGCGACATCCTGGGCGAGGCCCTCAAGGCCCGCAACGAAAAGAACTAA
PROTEIN sequence
Length: 571
MATTANPSRDDFAALLEQTLGQADGFEGRVVIGTVTGIENDLAVIDVGLKSEGRVPLREFAAPGQKADLKVGDEVEVYVDRVENSNGEAMLSRDRARREAAWDKLEAEFTESARVEGVIFGRVKGGFTVDLSGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRKRGNIVVSRRAVLEETRAEQRSGLIQSLAEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRVNHPSEMLNIGDTVRVQIIRINRDTQRISLGMKQLESDPWDGAAVKYPVGAKLSGRVTNITEYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDAEKRRISLGLKQAQQNPWEKFAAEHPVGTEVEGEVKNATEFGLFIGLDNDVDGMVHMSDIAWGISGEDALNLHRKGEVVKAIVLAVESDKERISLGMKQLERGGVAAAGSTTSADRLNKNQVVTVTILEVRDAGLEVQVGEDGATGFIKRTDLGRDRDEQRPERFQVGQKLDAMVTGFDRSKKPTFSVKAMQIAEEKQAVAQYGSSDSGASLGDILGEALKARNEKN*