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SCNpilot_expt_1000_bf_scaffold_4147_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 466..1011

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036E0147 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 170.0
  • Bit_score: 270
  • Evalue 1.60e-69
RNA polymerase sigma factor {ECO:0000313|EMBL:KGB56848.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 177.0
  • Bit_score: 266
  • Evalue 2.40e-68
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 209
  • Evalue 1.00e-51

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAAGATGCACCCTGCCGATCCGGATGCGGACCTCCTGGTCGGCGCGGTCGCCGGCGAACGCGAGGCGTTCCGGCTGCTCGTGGAGCGCCACTATGACCGCATCCATGGCCTGGCCTGGCAGTTGACCGGCTCGCGTGCCGATGCCGAAGACGTCGCCCAGGATGTGTGCTGCACGCTGGTGGAGCGGATCGGCAGCTTTCGCGGCGAGGCGAAATTCTCCACCTGGCTGTGCGGCATCGTGTTCAATGCCTGCCGCGACGTGCACCGTCGCCGCCGGTCGTTCGGGGGCGTCGCCCAGCGGCTTGCGGTGCTGGCCGGGCTGGCGCGGGGGCCGGACGGGCGCGACCTGCACGACGCGCTCTGGGTGAAGAGCGCGATCGCCCGCCTGCCCCCGGCCTATCGCGACACTGCGATTCTCGTCGCCGGACAGCAGCTGACGCATGCCGAGGCCGGCGCGATCCTCGGCGTGGCGGAGGCGACGGTCTCGTGGCGCATGCACGAAGTACGGCGGATGGTCGCCGGGAAGCCGGGCGCGGACGACTGA
PROTEIN sequence
Length: 182
MKMHPADPDADLLVGAVAGEREAFRLLVERHYDRIHGLAWQLTGSRADAEDVAQDVCCTLVERIGSFRGEAKFSTWLCGIVFNACRDVHRRRRSFGGVAQRLAVLAGLARGPDGRDLHDALWVKSAIARLPPAYRDTAILVAGQQLTHAEAGAILGVAEATVSWRMHEVRRMVAGKPGADD*