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SCNpilot_expt_1000_bf_scaffold_4147_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(5903..6400)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, partial n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3AF similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 166.0
  • Bit_score: 232
  • Evalue 2.50e-58
TonB-dependent receptor {ECO:0000313|EMBL:AJA08098.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 166.0
  • Bit_score: 227
  • Evalue 1.90e-56
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 170.0
  • Bit_score: 115
  • Evalue 1.80e-23

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGAGCCAGCCCATCAACGGCCCCGGCGCGGACATCAAGGGCATCGAAGTGGCGTTCCAGCACGACTTCACCTTCCTGCCGGGCGCGCTCAAGCATCTCGGCATGGTCGTCAACGGCACCTGGTTCGACGGGCACCTGCAGGGCAAGGTCGGCAACACCTTTGTCCGCCTGCCGCTGTTCAACCTGTCGAAATGGGCGGCGAACGCGACGCTCTACTATGAGGACAAGGACTGGGGCGTGCGCGTGTCCGACGCCTATCGGAGCAAATACTATACCGGCCTGGGCACGGTGGGGAATGTCGGCGACTATATCGCCGCCACGCACAACATCGATTTCCAGGCGCATGTGAACCTGATGAAGGGCGTCCGCCTGATCGCCGAGGGGATCAACCTCACCAACGAGCCGATCGAGCAGTTTGCCGGCGGCCCGATCGCGCGCCGGGTGGTCTACACCACCAGCGGCCGCACCTTCACTCTTGGCGTCAGCGCCGAGTTCTGA
PROTEIN sequence
Length: 166
VSQPINGPGADIKGIEVAFQHDFTFLPGALKHLGMVVNGTWFDGHLQGKVGNTFVRLPLFNLSKWAANATLYYEDKDWGVRVSDAYRSKYYTGLGTVGNVGDYIAATHNIDFQAHVNLMKGVRLIAEGINLTNEPIEQFAGGPIARRVVYTTSGRTFTLGVSAEF*