ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4043_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(25591..26427)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F25F8 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 272.0
  • Bit_score: 341
  • Evalue 8.50e-91
Diguanylate cyclase {ECO:0000313|EMBL:AJP72620.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 276.0
  • Bit_score: 408
  • Evalue 7.90e-111
response regulator receiver modulated diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 280.0
  • Bit_score: 280
  • Evalue 7.30e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGAGCGAGGGGATTTCGAACGTGCGCATTCTGATCGTGGACGACGAACCGGCGATGCACGAATCATATCGCCAGGTGTTCGGGGGCCGCAGCGGAGGCAATGCCAGCGCGCTGAACGCGATGGCGGCCGAGCTGTTCGGCGACGACGACGGGGCGCCCGAGCCGGCCAATGACGCGATCGATTTCCAGTGCGCGCACTTCAATCAGGGCCTCGACGCGGTCGAGGCGATCAAGGACTCGCTCGAGACCGGTCAACGTTTCTCCGTCGCCTTTATCGACGTGCGCATGCCGCCGGGGATCGACGGCAAGGAGACCGCGCGCCGCATCCGCGCGCTCGATCCCGACATCAACCTCGTCATCGTCACCGGCTATTCGGATTTCTCGCCTCTCGACATCAGCCGCGCCGCCGGCCCGGCCGACAAGATCTTCTACATCGCCAAGCCCTTCCAGGCCGAAGAGGTGATCCAGACCGCCACGGCGCTCGCGCATCGCTGGGAGGCGGATGCCAAGCTGCGCAATGCGATCGCCCTGCTCGAGGAGCAGAAGCTCGAGCTCGCAGCCAATGAATCGCGCGCCGTGCACATGGCGAACCATGATTCGCTTACCGACGCGCCCAACCGGCTCGCCTTCCTCCACATGCTCGGCAAGGCGGTGAAGGGCGAGCAATGCTTCGCCATGGCGATGATGGACCTCGACCGGTTCAAGATCGTCAACGACACGCTGGGCCATCTCGCCGGCGACGAGCTGATCCGCATGGTCTGCGAGATCCTGCGCCAGCAGGTGCCCGACCATGGTTTCGTCGCGCGCCTGGAACCGGTGAGGATGAGGCGACGATGA
PROTEIN sequence
Length: 279
MSEGISNVRILIVDDEPAMHESYRQVFGGRSGGNASALNAMAAELFGDDDGAPEPANDAIDFQCAHFNQGLDAVEAIKDSLETGQRFSVAFIDVRMPPGIDGKETARRIRALDPDINLVIVTGYSDFSPLDISRAAGPADKIFYIAKPFQAEEVIQTATALAHRWEADAKLRNAIALLEEQKLELAANESRAVHMANHDSLTDAPNRLAFLHMLGKAVKGEQCFAMAMMDLDRFKIVNDTLGHLAGDELIRMVCEILRQQVPDHGFVARLEPVRMRRR*