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SCNpilot_expt_1000_bf_scaffold_4255_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(3..563)

Top 3 Functional Annotations

Value Algorithm Source
permease n=1 Tax=Sphingomonas elodea RepID=UPI0002630302 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 187.0
  • Bit_score: 320
  • Evalue 1.00e-84
Permease {ECO:0000313|EMBL:AJP71076.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 187.0
  • Bit_score: 321
  • Evalue 6.50e-85
citrate transporter similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 187.0
  • Bit_score: 275
  • Evalue 9.20e-72

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAACACGCCCCAATTGCTCTCCGTCGGCGTGCTCGCCGGCATGATGCTGCTCTTCGTCTGGGGACGTTTCCGCTACGACATGGTCGCGGTGATCGCGCTGCTCGCGGCGCTGGCGCTGGGGATCGTTTCGCCCAAACAGGCCTTTACCGGCTTTTCCGACGACATCGTGATCATCGTGGCCAGCGCGCTCGTGCTTTCGGGGGCGGTGCAGCGCTCGGGCGTGATCGAGCGGGCGATGCTGGTGCTCCAGCGGCGCGTGACGCGGATCCGCTCGCAATTGCTGCTGCTCTGTGCCTCGGTCGGCTTCGCCTCCGCCCTGGTGAAGAATATCGGGGCGCTGGCGATGATGATGCCGGTCGCCTTCCAGATGGCCAAGCGCTCGAACATATCGCCGGCCGCCTATCTGATGCCGATGTCCTTCGCCTCGCTGCTCGGCGGGCTGATCACGCTGATCGGCACCTCGCCCAACATCATCGTCAGCCGGGTGCGCGAGGAGATGACCGGGCAGCCCTTCGGCATGTTCGACTATGCGCCGGTCGGGTTGGGGCTGACGTTGATG
PROTEIN sequence
Length: 187
MNTPQLLSVGVLAGMMLLFVWGRFRYDMVAVIALLAALALGIVSPKQAFTGFSDDIVIIVASALVLSGAVQRSGVIERAMLVLQRRVTRIRSQLLLLCASVGFASALVKNIGALAMMMPVAFQMAKRSNISPAAYLMPMSFASLLGGLITLIGTSPNIIVSRVREEMTGQPFGMFDYAPVGLGLTLM