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SCNpilot_expt_1000_bf_scaffold_3339_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(3..698)

Top 3 Functional Annotations

Value Algorithm Source
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 232.0
  • Bit_score: 398
  • Evalue 5.20e-108
gcvPA; glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 232.0
  • Bit_score: 379
  • Evalue 5.60e-103
glycine dehydrogenase subunit 1 n=1 Tax=Sphingomonas elodea RepID=UPI0002630F9C similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 232.0
  • Bit_score: 408
  • Evalue 6.10e-111

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCGCTACCTGCCCCTTACCCAGCCCGATCGCGAGGCGATGCTCGGCGTCGTCGGCGCCAGGTCGATCGACGACCTCTTCGCCGACGTGCCCGCCAGCGCGGTGCTCGACGGCCCGATCGCCGGCCTGCCGATGCATGCCAGCGAGCTTGCCGTCGAACGCCACATGACCAGGCTGGCGGCGAAGAACCTGGCGGCGGGGGCGGCGCCCTTCTTCCTCGGCGCCGGCGCCTATCGCCATCACGTGCCGGCGAGCGTCGATCACATCATCCAGCGCGGCGAGTTCCTCACCGCCTACACGCCCTATCAGCCGGAAATCGCGCAGGGCACGCTGCAGATGATGTTCGAGTTCCAGTCGCAGGTCGCGCGGCTGCTCGGCTGCGACGTGGCGAATGCCTCGATGTACGACGGCTCGACCGCGTGCTGGGAAGCCATCACCATGGCGCGGCGCGTCACCAAGCGCGGCAAGGCGATCCTCTCGGGCGGCCTCCACCCGCATTATGTCTCGGTCGCCGAGACCATGGCCAAGTTCACCGGCGACCAGCTCGTCACGTCGCTGCCGACGCTGAGCCCGACCCCGGATACCGATGACCTGATCGCCCGGATCGACGACGACACCAGCTGCGTCGTGGTCCAGTATCCCGACATTCTCGGCCGCATCGCCGACCTCTCCAAGCTCGCCGAGGCCGCGCATGCG
PROTEIN sequence
Length: 232
MRYLPLTQPDREAMLGVVGARSIDDLFADVPASAVLDGPIAGLPMHASELAVERHMTRLAAKNLAAGAAPFFLGAGAYRHHVPASVDHIIQRGEFLTAYTPYQPEIAQGTLQMMFEFQSQVARLLGCDVANASMYDGSTACWEAITMARRVTKRGKAILSGGLHPHYVSVAETMAKFTGDQLVTSLPTLSPTPDTDDLIARIDDDTSCVVVQYPDILGRIADLSKLAEAAHA