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SCNpilot_expt_1000_bf_scaffold_3339_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 5719..6156

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 143.0
  • Bit_score: 289
  • Evalue 2.80e-75
rnhA; ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 144.0
  • Bit_score: 255
  • Evalue 1.00e-65
RNaseH ribonuclease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031BA1A6 similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 143.0
  • Bit_score: 281
  • Evalue 5.40e-73

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGGAATTGCAACATGTCGAGATCGCCACCGATGGCGCGTGCAAGGGCAACCCGGGCAAGGGCGGCTGGGGCGTGGTGCTGCGCATGGGCGGCGTCGAGAAGGAACTCTCCGGCGGCGAGAAGCACACCACCAACAACCGCATGGAGCTGATGGCGGCGATCCAGGGGCTGAACGCGCTCAAGCGCCCCTGCCACGTCACCCTGTCGACCGACAGCCGCTACGTGATGGACGGCCTGACCAAGTGGATTCATGGCTGGCTGAAGAACGGCTGGAAGACCGCCGACAAGAAGCCGGTGAAGAATGCGGACCTGTGGCAGGAACTGCTCGCCGCCGCCAAGCCGCACCGCGGGGAATGGGTGTGGGTGAAGGGCCATGCCGGCCATCCCGGCAACGAGCGCGCCGACAAGCTGGCCAGCGACGCCGCGCTCGCCGCCTAA
PROTEIN sequence
Length: 146
MELQHVEIATDGACKGNPGKGGWGVVLRMGGVEKELSGGEKHTTNNRMELMAAIQGLNALKRPCHVTLSTDSRYVMDGLTKWIHGWLKNGWKTADKKPVKNADLWQELLAAAKPHRGEWVWVKGHAGHPGNERADKLASDAALAA*