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SCNpilot_expt_1000_bf_scaffold_3354_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 1442..2776

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHS similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 426.0
  • Bit_score: 706
  • Evalue 2.90e-200
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002631311 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 437.0
  • Bit_score: 695
  • Evalue 2.80e-197
  • rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 442.0
  • Bit_score: 642
  • Evalue 1.20e-181

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAACGCCCCCAAGAATCCCAGGACCTTCCAGGTCAAATCGTTCGGCTGCCAGATGAACGTCTATGACGGCGAACGCATGGCCGAGCTGATGGCCGCGCAGGGCATGACCGCCGCCGCCGAGGGCGAGGCCGCCGATCTCGTCGTGCTCAACACCTGCCACATCCGCGAAAAGGCGACCGAGAAAGTCTATTCGGACATCGGCCGCCTGCGGAAGGGCGCGCGCGCGGACGGGCGCGCGGAGCCGATGATCGCCATCGCCGGCTGCGTCGCCCAGGCCGAGGGCGAGGAGATCGTCCGCCGCGCCAAGGTCGATGTCGTCGTGGGCCCGCAGGCCTATCACAACCTGCCCGAGCTGGTGGCGAAGGCCGCCAGCGGCCAGTCGACCCTCGATACCGACATGCCGGCGCTCAGCAAGTTCGGCGCGCTGCCCCGGCGTCGCAAGGTCGGCCCCACGGCCTTCCTCACCGTGCAGGAAGGCTGCGACAAATTCTGCACCTATTGCGTCGTGCCCTATACGCGCGGCGCCGAGATCAGCCGGTCCTTCGCCGAACTGGTCGACGAGGCCAAGGCGCTCGTCGATGCCGGCGCGCGCGAGATCACGCTGCTCGGCCAGAACGTCAATGCCTGGGACGACGATGCCGGCACCGGGCTGCACGGCCTGATCCGCGCGCTCGATCGGATCGAGGGCCTGGAGCGCATCCGCTACACCACCAGCCACCCCAACGACATGCGCGAGGGCCTGATCCGTGCCCATGCCGAAGTGGCCAAGCTGATGCCGTTCCTCCATTTGCCGGTGCAGGCGGGAAGCGACCGCATCCTCAAGGCAATGAACCGCAGCCACACGCGCGATTCCTATCTGGAGATTCTCGAGCGCGTCCGCGTCGCGCGGCCCGACATCGCACTGTCGGGCGATTTCATCGTCGGCTTCCCGGGCGAGACCGACGCCGAGTTCGAGGAAACGCTGCGCCTGGTCGACGCAGTGGGCTATGCCCAATGCTTCAGCTTCAAGTACAGCCCGCGCCCGGGCACGCCCGCCGCAGAGATGACCGATCGGTTCGTTCCCGCCGAAGTGATGGACGAGCGCCTGCAGCGCCTCCAGGCCGCGCACAACCGCGACCAGCTCGCCTTCAACCGCGCGACCGCCGGCAAGCGCTGCCCGGTGCTGATCGAGCGCCAGGGCAAGCTCCCCGGCCAGATGCTCGGCAAGTCGCCCTGGCTCCAGTCGGTCTATCTCGATACCGATGCCGGGATCGGCGACATGGTCGATGTCGAGATCGTCGCGGGCTTCGCCAATTCGCTGCAAGGAACCGAAATGGTCCGCGCGGCGGCCTAG
PROTEIN sequence
Length: 445
MNAPKNPRTFQVKSFGCQMNVYDGERMAELMAAQGMTAAAEGEAADLVVLNTCHIREKATEKVYSDIGRLRKGARADGRAEPMIAIAGCVAQAEGEEIVRRAKVDVVVGPQAYHNLPELVAKAASGQSTLDTDMPALSKFGALPRRRKVGPTAFLTVQEGCDKFCTYCVVPYTRGAEISRSFAELVDEAKALVDAGAREITLLGQNVNAWDDDAGTGLHGLIRALDRIEGLERIRYTTSHPNDMREGLIRAHAEVAKLMPFLHLPVQAGSDRILKAMNRSHTRDSYLEILERVRVARPDIALSGDFIVGFPGETDAEFEETLRLVDAVGYAQCFSFKYSPRPGTPAAEMTDRFVPAEVMDERLQRLQAAHNRDQLAFNRATAGKRCPVLIERQGKLPGQMLGKSPWLQSVYLDTDAGIGDMVDVEIVAGFANSLQGTEMVRAAA*