ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3354_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(13901..14131)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KBL9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 76.0
  • Bit_score: 129
  • Evalue 1.10e-27
TonB-dependent receptor plug {ECO:0000313|EMBL:AJA09471.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 76.0
  • Bit_score: 133
  • Evalue 1.00e-28
cyclic nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 76.0
  • Bit_score: 87
  • Evalue 2.50e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
AACACCTCGAAGCTGCCGGCCTATACGGTGATCAATGCCAGCGTCAGCCTGGGCCTGACCAAGAACATCCGCCTCTGGGCCTATGGCGACAACCTCACCAACACGATCGGCCTTACCGAAGGCAATCCGCGCGCGGGCGAGCTGACCAGCGGCCAGGCCAACGACCTGCTGTTCATCGGCCGCCCGATCGTGGGCCGCAACATCCGCTTCGCGGTCGACTTCTCGTTCTGA
PROTEIN sequence
Length: 77
NTSKLPAYTVINASVSLGLTKNIRLWAYGDNLTNTIGLTEGNPRAGELTSGQANDLLFIGRPIVGRNIRFAVDFSF*