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SCNpilot_expt_1000_bf_scaffold_5353_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(16912..17565)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630D74 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 217.0
  • Bit_score: 327
  • Evalue 7.60e-87
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP73477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 217.0
  • Bit_score: 340
  • Evalue 1.60e-90
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 205.0
  • Bit_score: 252
  • Evalue 9.70e-65

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGCAAGGGGGCGTGGCATGAGCGCCACAGCACCGGATCTGGGCGGCGGCGAGGCAAGTGCGGGCAAGGAGCCGCGCACGGCACGCGGGCGGCGAACGCTGCGCCTGATCCTGGACGCGGCGGCGGAGGAATTCGGCGCCAAGGGATTCCACGAAGGATCGATCAGCGGCATCACGCGCCGCGCCGGCGTCGCGCTGGGCAGCTTCTACACCTATTTCGATTCGAAGGACGACGTGTTCCGCGCGCTGGTGCGCGACATGAGCGAGCAGGTGCGCGAGCATGTGGCCCCGGCGATCAAGGGCGCGACCGGCGGCCAGATCGCGGCCGAGCAGGCGGCGCTGCTCGCCTTCATCCGCTTCGCGCGCGCGCACAAGGAGATCTACCGGATCATCGACGAAGCCGAGTTCGTCGACCCCGAGAGCTTCCGCATGCATTATGCGACCACCGCCGAGCGCATCGCCAGGCGCCTTCAGGCGGCGGCGGCGCGCGGCGAGGTGCGCGAGGATGTGAACGAGATCCACGCCTGGGCGATCATGGGCATGAACGTGTTCCTGGGCCTGCGCTACAGCGTGTGGCAGGAGGACGTCGATCCCGAGGCGATCGCGCAGACCGTCGCGGCGATGCTGACGCGCGGAATCGGGACGGAGCGATAG
PROTEIN sequence
Length: 218
MARGRGMSATAPDLGGGEASAGKEPRTARGRRTLRLILDAAAEEFGAKGFHEGSISGITRRAGVALGSFYTYFDSKDDVFRALVRDMSEQVREHVAPAIKGATGGQIAAEQAALLAFIRFARAHKEIYRIIDEAEFVDPESFRMHYATTAERIARRLQAAAARGEVREDVNEIHAWAIMGMNVFLGLRYSVWQEDVDPEAIAQTVAAMLTRGIGTER*