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SCNpilot_expt_1000_bf_scaffold_5103_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(1174..1809)

Top 3 Functional Annotations

Value Algorithm Source
sex pilus assembly and synthesis protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003778824 similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 211.0
  • Bit_score: 413
  • Evalue 1.00e-112
  • rbh
Conjugal transfer protein {ECO:0000313|EMBL:EXS69370.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 211.0
  • Bit_score: 408
  • Evalue 7.80e-111
putative sex pilus assembly and synthesis protein; K12067 conjugal transfer pilus assembly protein TraE similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 213.0
  • Bit_score: 323
  • Evalue 5.70e-86
  • rbh

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGCTTTTCCCTTCAGGCGCAAGCCCCAGGCCGATATGATCGGCGATACGCGGCCGAGCTGGCACCTGCACCGCTACCTGCAGGGATCGGCCAACCTCTTCGAGGAAAATCGACTTCTCAAGGTCGCGATCGCCGGCCTCTTCGGCATCACCGCGGTCCTGGGCACGGTCATCTACACCTCGAACCAGAACACACGAACGGTGATCGTCCCGTTCGGCGCGGACGGCGACCTCTATGTGACGGGCAACAAGCCCTCCGAGGCCTATCTCCGGGCGATCACCTTCAACATCGTCGGCCTTGCCGGCACCTATTCCGCCTATTCGGCTGACCGGCAGTTCCACGAGCTGCTGCGGATCGCGCATCCCAGCGCCTATAATGGCCTGCGCGACAGCCTGAACCGGCTGCTCGATGAGCTCGGCAACAATCCGACGCTCTCGATCGCAACCTATATCCGGGGCGACCAGCCCGTCACCTGGACGGGCAGCGAGATCCTTGTCCCCGTCGAGAAAGTCCGCGTGATCGGCGGCGTGATCCGCAAGTTCCGGGGCAATCTGCGCATTCGCTACGCGCTCGAGAATGGCCGTTTCTGGCTGACCGCCCTGCAGGAGGAGAATTTCAATGCCGATATCCGGTAA
PROTEIN sequence
Length: 212
MAFPFRRKPQADMIGDTRPSWHLHRYLQGSANLFEENRLLKVAIAGLFGITAVLGTVIYTSNQNTRTVIVPFGADGDLYVTGNKPSEAYLRAITFNIVGLAGTYSAYSADRQFHELLRIAHPSAYNGLRDSLNRLLDELGNNPTLSIATYIRGDQPVTWTGSEILVPVEKVRVIGGVIRKFRGNLRIRYALENGRFWLTALQEENFNADIR*