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SCNpilot_expt_1000_bf_scaffold_5434_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 7000..7203

Top 3 Functional Annotations

Value Algorithm Source
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 1.40e-24
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41); K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 68.0
  • Bit_score: 100
  • Evalue 2.50e-19
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT20_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 68.0
  • Bit_score: 119
  • Evalue 9.80e-25

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGACGAGCTGGAATCCGGTTGAAATGGCGCGCAGCCTTGGCGGGGGCCTCCTGTCCTTTCCGGTCACGCATTTCGATGCCGACGGCGCCTTTGCCGAGCATGCCTATCGCGAGCATTGCGCATGGATGCTGTCGCACGAGCTGTCGGGCCTGTTCGCTGCGGGTGGCACCGGCGAGTTCTTCTCGCTCACTCCGGCCGAAGTG
PROTEIN sequence
Length: 68
VTSWNPVEMARSLGGGLLSFPVTHFDADGAFAEHAYREHCAWMLSHELSGLFAAGGTGEFFSLTPAEV