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SCNpilot_expt_1000_bf_scaffold_8738_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 513..1184

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI000263088B similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 203.0
  • Bit_score: 305
  • Evalue 4.10e-80
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP71799.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 203.0
  • Bit_score: 292
  • Evalue 3.90e-76
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 194.0
  • Bit_score: 262
  • Evalue 1.60e-67

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCGGAAGGGCCGCAAGGCATTGGACTTTTGGGTCCATCAACATTATGTACCGGTCATTATGGAAATCACCGCCTGTGCCGTCGCCAAGGGGCGCCCCCGCGAATTCGACACCGACTCGGCGTTGACCGCGGCGCTGCGCGTCTTCTGGAGCAAGGGTTATGAGGGCGCCTCGCTGAGCGACCTGACCGAAGCGATGGGGATCACCCGGCCGAGCCTCTATGCGGCGTTCGGCAACAAGGAAGCGCTCTTCCGGAAGACGCTGGATCTCTATCAGCGCGAGAAGCTCGACTATATGGGCAAGGCGCTCGACGCGCCGACTGCGCGTGGCGTCGCCGAGCGGCTGCTGATCGGCGCGCTCGAGATGCAGATGAGCTCGTGCGATCCCAAGGGCTGTATGGGCGTGATCAACTCGGTGGCTTGCGGGGCCGAAGCGGAGTCGATCCGCGCCGAGGTGCTCAAGCGCGGGGCAACCGTGAAGCAGGGCCTGATCGATCGATTCGAGCGCGCCAAGGACGAAGGCGACCTGCCCGCCGATACCGACGTGATCGGGCTCACCGCCTATCTGACCGCACTGCTCCAGGGCATTGCGCTCCAGGCCGGCGGCGGCACGTCGTGCGCCGATCTTCAGGCGCTGATCGACACCAGCCTGGCCTGCTGGCCGAGCAAGTAA
PROTEIN sequence
Length: 224
MRKGRKALDFWVHQHYVPVIMEITACAVAKGRPREFDTDSALTAALRVFWSKGYEGASLSDLTEAMGITRPSLYAAFGNKEALFRKTLDLYQREKLDYMGKALDAPTARGVAERLLIGALEMQMSSCDPKGCMGVINSVACGAEAESIRAEVLKRGATVKQGLIDRFERAKDEGDLPADTDVIGLTAYLTALLQGIALQAGGGTSCADLQALIDTSLACWPSK*