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SCNpilot_expt_1000_bf_scaffold_8989_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 3362..4621

Top 3 Functional Annotations

Value Algorithm Source
secretion system protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630CCE similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 371.0
  • Bit_score: 461
  • Evalue 8.40e-127
Flp pilus assembly protein CpaC {ECO:0000313|EMBL:GAO39653.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 426.0
  • Bit_score: 477
  • Evalue 2.70e-131
type II secretion system protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 363.0
  • Bit_score: 347
  • Evalue 5.60e-93

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACTCGCAAGCTTCTCCTGAAGCGCTCGCTCGCCGCGATCGTGTCGACCGCGCTGGTCGGCACGCCGGCGACCGGCTTCGCCCAGACCGCCAAGTCAAAGCGGCCCCACCCGGCACGCACCAATGCGCCGGCCCGCACCAATGCGCCGGCCCGCACCAATGTGGGCGTCGCCAACCTGCCGCCGGGCACGCAGCGGCCGAGCGGCGAGATCCTGCTCTCGACCGGCCAGGGCGAGTTGATCACCCTTCCCGCCACCGTCGCCAACGTCTGGACTTCCAATCCGTCCGTCGCCGACATCTATGTGAACAATCCGCGCCAGATCCATCTGTTCGGCAAGGAGTTCGGCGAGGCGACGGTGTTCGCGACCAGCGCCTCGGGCGCGGTGGTCTTCTCCACCAATGTCCGCGTGGCGCAGAACATCACTTCGATCGACCGCATGGTGAAGGTGGCGATGCCCGATGCGGACGTCCAGGTGACCACGGTCGGCCAGATCGCGGTGCTCAACGGCACGGTGAAATCGCCGCAGGACAGCGAACAGGCGCAGCGCCTGGTAACCGGGCTGCTCAACCCTGGCGTCAACGTCAACGACCCCAATGCGCAGGTCAAGATCGCGGTGATCAACCGTCTGCGGACCGCCACGCCGCTGCAGGTGCAGCTGCAGGTGAAGTTCGCCGAAGTGAGCCGCAGCTTCGTCAAGAACATTGGCGTTAATTTCAGCACTAAGGACTCGACCGGGGGCTTCCAGTTCGGCCTGGCCCAGGGCCGCAGCCCGGGCTCGTTCTCGGCGGCGGACCTCGCCAAATATCCGACCGCGACGATGACGCAGAACGGCGTCACCATCACCGGCGCCTATGATCCCTCCACGGGCAGGTTCGTCAATCCGCGCGCCAGCGGCCTGGCCGACATCACCCGCGGCTCCGACAACGCCACCATGGGCCTGGCGGGCAAGCTGTTCGGCCTCGACGTGCTTCCGGCCATCGATCTCGGCGAGACGATCGGCCAGGTGACCACGCTCGCCAATCCGAACCTCACCGCGCTTTCGGGCGAGACGGCGAACTTCCTCGCCGGCGGCGAGATCCCGATCCCGGTCGCGCAGGGCCTGGGCACCACCACGGTGGAATACAAGCAGTACGGCATCAGCCTGGCCTTCACGCCGACGGTGCTGGCCGATGGCCGCATCTCGCTGCGCGTACGCCCCGAAGTGTCGCAGCTGACTTCGGCCGGCGCGGTGCAGCTGAACGGCGTCACCATCCCCGCG
PROTEIN sequence
Length: 420
MTRKLLLKRSLAAIVSTALVGTPATGFAQTAKSKRPHPARTNAPARTNAPARTNVGVANLPPGTQRPSGEILLSTGQGELITLPATVANVWTSNPSVADIYVNNPRQIHLFGKEFGEATVFATSASGAVVFSTNVRVAQNITSIDRMVKVAMPDADVQVTTVGQIAVLNGTVKSPQDSEQAQRLVTGLLNPGVNVNDPNAQVKIAVINRLRTATPLQVQLQVKFAEVSRSFVKNIGVNFSTKDSTGGFQFGLAQGRSPGSFSAADLAKYPTATMTQNGVTITGAYDPSTGRFVNPRASGLADITRGSDNATMGLAGKLFGLDVLPAIDLGETIGQVTTLANPNLTALSGETANFLAGGEIPIPVAQGLGTTTVEYKQYGISLAFTPTVLADGRISLRVRPEVSQLTSAGAVQLNGVTIPA