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SCNpilot_expt_1000_bf_scaffold_10184_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(3703..4080)

Top 3 Functional Annotations

Value Algorithm Source
signal transduction histidine kinase (EC:2.7.3.-) similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 119.0
  • Bit_score: 121
  • Evalue 2.00e-25
regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630B21 similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 103.0
  • Bit_score: 131
  • Evalue 7.80e-28
PAS domain S-box {ECO:0000313|EMBL:EJK85043.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 120.0
  • Bit_score: 129
  • Evalue 4.20e-27

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGGCGTCCATCGCCGGCAAGCGCTTCGCGATCATCGAGGACGAGCCGCTGGTCGCGCTCGAACTCGCCGCGATCCTCGCCGATGCCGGCGTGGAAGTGGTCGGCCCGGCCGCGACCGCCGAGCATGCCCGGGCGATCGTCGAAGGCGGACGGATCGACGGGGCGCTGCTCGACGGCAATTTGCAGGGCGCCAGCGTCGAGGCGATCGCAGCCGCGCTCGATGCGCATGGCGTGCCCTTCGCCTTTGTCAGCGGCTATGGCCGCGACCATCTGCCCGAGGGGTTCGCCGAGGTGCCGGCGATCGGCAAGCCCTTCGATCCCGTCGAGATCGTGGAAGTTGCCGGAGCCTTGCTGCGCGGCAAGGCGGTCCTCGCCTAG
PROTEIN sequence
Length: 126
MASIAGKRFAIIEDEPLVALELAAILADAGVEVVGPAATAEHARAIVEGGRIDGALLDGNLQGASVEAIAAALDAHGVPFAFVSGYGRDHLPEGFAEVPAIGKPFDPVEIVEVAGALLRGKAVLA*