ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11199_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 2322..2951

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFFF22 related cluster n=1 Tax=unknown RepID=UPI0003CFFF22 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 207.0
  • Bit_score: 150
  • Evalue 1.60e-33
Uncharacterized protein {ECO:0000313|EMBL:AJP70772.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 209.0
  • Bit_score: 285
  • Evalue 7.60e-74
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 207.0
  • Bit_score: 146
  • Evalue 7.20e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGGCGCCCGCCAATGCCAGCAATCGCGGCGCCGTGCTTCCCGCCGCCATCTCGCGCCAGGCCGAGCTGGGGCTGAAATACGGCTTTGCCGGCGGGCCGACGCTGATCGCCGGCCTGTTCGACCTGTCCAAGCCGACGCCCGGGATCGATGCCGCGGGCGCGTTCGATTTCGTCGGCACGGTGCGCCATCGCGGCGTGGAGCTGTCGCTGGCCGGGCCGCTCACGTCGCGGCTGAATGCGGTGCTGGGCGCGACCTGGCTCGATGCCAGGATCGACGGCGAGCTGGTGGATCGCGGCGTGATCGGCGTCCGCCCGATCGGCCGGCCGCGCGTGACCGCGCTCGCCAACCTCACCTGGCGCGTGCCCGGCGTGGAGGGGCTGACGGTGGATGGCGGCGTGAACGTCCGCGGCGCGCGCTATGCCGATCGCGAGAACAGCGTCGCGCTGCCCGGCTATGCGCTGTTCAACCTGGGGCTCCGCCAGGCCTTCGCGGTTGGCGGCCATCCGGTGACGCTGCGCGCGCGCGTGACCAACCTGACCGATCGCTTCGCCTGGAACCCGGCCAGTTCGGGGCTGATCACGCCGATCGCTCCGCGCACGCTGACCTTGACGCTGACGAGTGCGCTCTAG
PROTEIN sequence
Length: 210
VAPANASNRGAVLPAAISRQAELGLKYGFAGGPTLIAGLFDLSKPTPGIDAAGAFDFVGTVRHRGVELSLAGPLTSRLNAVLGATWLDARIDGELVDRGVIGVRPIGRPRVTALANLTWRVPGVEGLTVDGGVNVRGARYADRENSVALPGYALFNLGLRQAFAVGGHPVTLRARVTNLTDRFAWNPASSGLITPIAPRTLTLTLTSAL*