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SCNpilot_expt_1000_bf_scaffold_31630_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: 3953..4297

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingomonas elodea RepID=UPI0002630DDC similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 112.0
  • Bit_score: 171
  • Evalue 3.70e-40
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor {ECO:0000313|EMBL:CCW19247.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 111.0
  • Bit_score: 169
  • Evalue 3.30e-39
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 109.0
  • Bit_score: 158
  • Evalue 1.30e-36

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGTGACCTCGGCGACTTTCGCCGGCATCACCGGCAATGGTGCCACCGGCCAGCTCGACACCAATTTCCGCCGGACCCGCGTCAAGAACGACTCGATCGCGCTGATGTTCGACTGGAAGCCGGGCGCGTGGGAGATTTCGGGCAATTTCGGCGCGACCCGCGCGTCGGGCGGCAAGGATCCCGAATATCTGCTCGACTTCCGCACGAAACAGGGTTTCACGTCCGGCACCAACGGCAAGAATACCTATGTCAACTGGCAGTTCCCGGCGAGCGACGCGTCGCGCTGGCTGAGCAATTTCACGGCGCTCGGCGGCGAGAACCAGAGCGAGCCCGCGGTGCTCGCG
PROTEIN sequence
Length: 115
MVTSATFAGITGNGATGQLDTNFRRTRVKNDSIALMFDWKPGAWEISGNFGATRASGGKDPEYLLDFRTKQGFTSGTNGKNTYVNWQFPASDASRWLSNFTALGGENQSEPAVLA