ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2558_14

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 10260..10799

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1Q0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 193.0
  • Bit_score: 93
  • Evalue 2.60e-16
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 161.0
  • Bit_score: 96
  • Evalue 5.60e-17
OstA-like protein; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 205.0
  • Bit_score: 78
  • Evalue 2.10e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus sp. 361 → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGAACGCGCGCCGTCTTCCTTTTCTTTTCGCTGTGGCGTTCGCGCTCATACCCGCAACCGGATATGCCGCCACGGCCGTCAATCTCGGCAAGCACAATGCCGATGCACCGATTCAGGTTTCGGCGGACAGCTTCATTGCCGACATCAACGCCAAAACCGGCACCTACACCGGCAATGTCGTTGTCAGCCAGGGTGATTTCAAACTCCGGGCCGACAAGGTGCGGATCAATGTCGTGCAGGGCAAGCCCAGCAGAATTGTCGCCGACGGCCATGTGGTGTTCGATTCGCCGTCGGGCGCCGCCCATGGCGATACCGGCGTTTACGAGGTGGGCCCGCGGCTCATCACACTCAGCGGGCGCGTGCTTCTGACCAAGGACAAGAACGTCATGCGCGGCACGCAATTGACCGTCAATCTGGTGACGGGTGCCGCGCAATTGCGTGCGAAGGGCGAGCAGGGCGGGCGTGTTCAGGGGCTTTTCACGCCGCCGCCGCGTTCGGCGCCGCCTAAAAGTCAATCGAATCCGCAAACCAACCCGTAA
PROTEIN sequence
Length: 180
VNARRLPFLFAVAFALIPATGYAATAVNLGKHNADAPIQVSADSFIADINAKTGTYTGNVVVSQGDFKLRADKVRINVVQGKPSRIVADGHVVFDSPSGAAHGDTGVYEVGPRLITLSGRVLLTKDKNVMRGTQLTVNLVTGAAQLRAKGEQGGRVQGLFTPPPRSAPPKSQSNPQTNP*