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SCNpilot_expt_1000_bf_scaffold_2558_16

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: 11666..13183

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCJ3_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 503.0
  • Bit_score: 582
  • Evalue 3.00e-163
  • rbh
rpoN; RNA polymerase factor sigma-54; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 503.0
  • Bit_score: 582
  • Evalue 9.50e-164
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 503.0
  • Bit_score: 582
  • Evalue 4.20e-163

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Taxonomy

Phenylobacterium zucineum → Phenylobacterium → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGCGATTTCACAGCGCCTCGAGCTCCGGCAGGGGCAATCCCTTGTCATGACCCCGCAGTTGCAGCAGGCGATCAAGCTGCTGCAATTGTCCAATCTCGAACTCACCGCCTATGTCGAGCAGGAGCTGGAGCGCAATCCGCTGCTGGAGCGTGATGAATCGGCGCCTGTCGGCGAAGCTGCCGAGCCTGAAGCCGCGCCCGATACGGCGCCTGCGGCCGAAACGCTCGACGTTGCGCTTTCGCATGATGATTTTTCCCGTGCCGACGATATGGATGCCGGCCGCGGCGACCTCTATGGCGAGGAGGCGCCAAGCCGCGCCACGGGAGAGGCCGCACCGCTGTCGGATTGGACGACCATGCGCGCGGGGCAACGCAGTGGCGAAGAAGACATTCTCGAATCCACGCTGACGCAAGCCGGCACGCTGCAGGATTATCTGCGCGATCAGCTTGCGATTGCCGCGCTTGATCCGGTCGGACGGATGATCGGCCTTGCGCTGATCGATATCGTCGATGAAGCGGGTTATATGCGCGGCGATCTGGATGAAATCGCCGATCGCCTGGGAACGCCGCGTGAAACCGTGGATGCGGTTCTCGCAATTCTGCAGGGCTTCGATCCTGTGGGCGTCGGGGCGCGCGATCTGGCCGAGTGTCTGAAATTGCAATTGCAGGCGCGCGACCGTTTCGATCCGGCGATGGAGATCATGCTGCTCAGGCTCGATCTGGTGGCGCGGCGCGATATCGCGGCGCTGTCCACGGCCTGCGGCCTCGATCATGACGATATCACCGACATGATCGCGGAGATTCGCGAGCTCACGCCGAAGCCCGGCCTTGCTTTCGGTGCGGAGCCGGTTCAGCCCGTCGTGCCGGATGTTTTCGTTCGCGAAGGGGCCGATGGCGGTTGGCATGTCGAACTGAACAGCGAGACTTTGCCCCGTCTGCTGGTCAATTCACGCTACTACGCCAAAGTGTCGGCCCGCGCGCGCGAGAAAGATGCCAGGAATTATCTGACGGATTGTCTCAACAACGCGAACTGGCTGGTCAAAAGCCTCGATCAGCGTGCGCGCACCATTCTGAAGGTAGCGTCCGAACTGGTGCGCCAGCAGGACGGATTTCTGACGTATGGCGTGCGCCATCTGCGCCCGCTCAATCTGCGTGCGATTGCAGATGCGATTTCGATGCACGAATCGACGGTCAGCCGCGTGACCTCGAACAAATATATTGCGACGCCGCGCGGCGTTTTCGAGATGAAATATTTTTTCACCGCCGCGATTTCCGCAACCGATGGTGCGGAAGCCCATTCCGCCGAAGCTGTGCGCGATCGTATCCGCGAACTGATCGACAATGAAGAAGCCGCCGAAACACTGTCGGATGACCGGATTGTCGCGCTTTTGACGGCGGATGGCGTTAATATTGCGCGGCGGACGGTGGCCAAATACCGTGAAGCCATGCGCATCCCGTCCTCTGTTGAACGGCGGCGGCTGAAGTCAAGCGATATTTCGGCTCACGCACAGCCCTGA
PROTEIN sequence
Length: 506
MAISQRLELRQGQSLVMTPQLQQAIKLLQLSNLELTAYVEQELERNPLLERDESAPVGEAAEPEAAPDTAPAAETLDVALSHDDFSRADDMDAGRGDLYGEEAPSRATGEAAPLSDWTTMRAGQRSGEEDILESTLTQAGTLQDYLRDQLAIAALDPVGRMIGLALIDIVDEAGYMRGDLDEIADRLGTPRETVDAVLAILQGFDPVGVGARDLAECLKLQLQARDRFDPAMEIMLLRLDLVARRDIAALSTACGLDHDDITDMIAEIRELTPKPGLAFGAEPVQPVVPDVFVREGADGGWHVELNSETLPRLLVNSRYYAKVSARAREKDARNYLTDCLNNANWLVKSLDQRARTILKVASELVRQQDGFLTYGVRHLRPLNLRAIADAISMHESTVSRVTSNKYIATPRGVFEMKYFFTAAISATDGAEAHSAEAVRDRIRELIDNEEAAETLSDDRIVALLTADGVNIARRTVAKYREAMRIPSSVERRRLKSSDISAHAQP*