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SCNpilot_expt_1000_bf_scaffold_6547_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: comp(3781..3969)

Top 3 Functional Annotations

Value Algorithm Source
RND-family efflux transporter n=2 Tax=Sphingobium RepID=D4Z8P4_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 50.0
  • Bit_score: 81
  • Evalue 3.60e-13
cusC; RND-family efflux transporter similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 50.0
  • Bit_score: 81
  • Evalue 1.10e-13
RND-family efflux transporter {ECO:0000313|EMBL:BAI98976.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 50.0
  • Bit_score: 81
  • Evalue 5.00e-13

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGCTTGCCCGCATCCGCTATCGTGAGGGCGTCGTCAACTATCTCGAAGTGCTTGATGCTGAGCGCAACCTGTTCACGGCTGACCAGGCACTGATCCAGGTGCGCAGAAGCGAACTCGGCAATCTCGTCTCGCTCTATGTCGCGCTTGGCGGCAAGGCGTTGGAGAAAAGCTCTCCTATTCAAGGGTAA
PROTEIN sequence
Length: 63
MLARIRYREGVVNYLEVLDAERNLFTADQALIQVRRSELGNLVSLYVALGGKALEKSSPIQG*