ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6547_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 32 / 55 BSCG 33 / 51 MC: 1 ASCG 9 / 38
Location: comp(4127..5011)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=2 Tax=Saccharopolyspora erythraea RepID=T2S5P7_SACER similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 302.0
  • Bit_score: 326
  • Evalue 2.30e-86
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 302.0
  • Bit_score: 326
  • Evalue 7.20e-87
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAM01245.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 302.0
  • Bit_score: 326
  • Evalue 3.20e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharopolyspora erythraea → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGGCGAAACGGAACTTCTGGCGCAACAGTTCGAGGCCAACCGGGCGCATCTGCGCGCGGTCGCCTATCGCATGCTGGGTTCGCAGAGCGAGGCGGAGGACGCAGTACAGGAAGCCTGGCTGCGCCTTTCCCGCACCGACGCGAACGCGGTCACCAACCTGACCGGCTGGCTCACAACCGTCGTCGCCCGTGTTTGTCTCGACCTCCTGCGCACACGGAAAATCCGCCGCGAAGAACCCATCGGCATCGAGGCGGAAACGCTGGCCAGCCATGACGATGCAGAACGTGACGCCGCATTGGCCGATTCCATCGGTGCGGCGATGCTCGCGGTGCTGCAAACCCTGTCACCGCCGGAGCGCGTGGCCTTTGTATTGCATGACATGTTCAGCCTGCCGTTCGAAGACATTGCGCCCATCATCGGCCGTTCGCCGGTGGCGGCCCGGCAATTGGCAAGCCGCGCACGGCGCCGCGTGCAGGGAAAGCCCGCGCTATCGGAAGCCGACCGCACACGGCAGCGCGAAATCGTCCAGGCGTTTCTGGCCGCATCCCGCGGCGGCGATTTTGCCGCCCTGCTGGCGGTGCTTGACCCGGCGGTGGTGGTGCGCGCCGATGCAGCCGCGGTTGCCGCGAGTGCCGCCCGCGCCAGCGAAGGGGCACCGGCGCTGGAGCCGGAGATTCATGGCCGTGAACGCGTGGCGAAACTGTTCCGGGGGCAGGCGCGCGCCGCGCAACCGGCAATGGTGGATGGCAATCCGGGCCTTGTCTTCGCACCCGGCGGCAAACCGTTTGCGGTGTTCGAGTTCGTGATCGCAAACGATGCGATCATGGAAATCGTGCTGACGGTCGATGCCCAAACGATCGGGACGCTGACATTGGAATATTGA
PROTEIN sequence
Length: 295
MGETELLAQQFEANRAHLRAVAYRMLGSQSEAEDAVQEAWLRLSRTDANAVTNLTGWLTTVVARVCLDLLRTRKIRREEPIGIEAETLASHDDAERDAALADSIGAAMLAVLQTLSPPERVAFVLHDMFSLPFEDIAPIIGRSPVAARQLASRARRRVQGKPALSEADRTRQREIVQAFLAASRGGDFAALLAVLDPAVVVRADAAAVAASAARASEGAPALEPEIHGRERVAKLFRGQARAAQPAMVDGNPGLVFAPGGKPFAVFEFVIANDAIMEIVLTVDAQTIGTLTLEY*