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SCNpilot_expt_1000_bf_scaffold_4761_5

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_14

near complete RP 44 / 55 BSCG 45 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3411..4685)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B701A5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 420.0
  • Bit_score: 398
  • Evalue 1.20e-107
  • rbh
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 423.0
  • Bit_score: 307
  • Evalue 5.00e-81
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABG04979.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 423.0
  • Bit_score: 307
  • Evalue 2.20e-80

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
TTGTCCCAGAGAAGAAGCGGCTTGCTGGCCGCCGGTGTTGCCGTTGTTGCCCTGTCTTTCGGATTGGCCGCCTGTGGTGGCTCCGACGACGATGGCGGAGGGTCGGGCTCCGGCACTGGCGCCAACGAGGTTTCGATCTACTCGAGCTTCCCCCTGCAGGGCGCTTCCCGCCCGACCGGCATCTCGCTGCAGAACGGCGTCCAGCTGGCCCTCGAACAGGCCGGCAACAAGGCCGGTGGGGTGGACATCAACTTCGTCCCCCTGGATGACTCGACCGCACAGGCGGGCGAGTGGACCCCCGAGGCTGAATCGGCCAACGCGAAGAAGGCCGTTCAGGACGATTCGGCGGTCGCCTACATCGGCACCTACAACTCGGGTGCGGCGGCGATCTCGATCCCGATCCTCAACGAGGCGGGCCTGGCGATGCTCTCGCCCGGCAACACCGCGGTCGGCCTAACCTCGGACGCACCGGGTGCCGACACCGGGATCGGCGAGCCGGACATCTACTACCCGACCGGCGAGCGTAACTACGCCCGCATCGTCCCCAAGGACACGGTCCAGGGTGCGGCGCTGGCCGGCCTCATGGACGAGGACGGCTGCACCAAGGTCGGTGTCCTCAACGACAACGAGGTCTACGGCAAGGGTCTGGCCGCGAACGTGATCGACGCCGGCTCGAAGTTCGACTACGAGTTCGCCGACGGTGGCGCGATCGACACCCAGGCGGCTAACTTCCGGTCCACCGCGAAGGACTTCGCGAGCCAGGGCGTCGACTGCTTCGTCTTCGGCGGGATCACCGCCTCGAACGCGGTCCAGCTCTACAAGGACATGGGCGCCGCGATGCCTGACGCGAAGCTCTACGGCCCGGACGGCGTCGGGGATTCCGACTTCGCCGGCGGCCTGCCGGCCGATGTCGCGTCCCGCACCAAGGTGACGGTCCCGACCCTGTCGCAGGAGGCATACGGCAAGGAAGGCGCCAAGTTCTTCAAGGATTACGCTGCCAAGTTCGGCGAGGACGAGAACAAGATCGGCCCGTTCGCCATCTACGGATACGAGGCCGGCAAGCTGATCCTCGACGTGCTCGACCGGGCCGAGGACCCGACCAACCGGGCCGACGTGGTGAAGGCGATGTTCGACACCAAGGACCGCAACTCGATCCTCGGCAAGTACTCGATCGATGAGAACGGAGACACCACCCTGACCGATTACGGCGTCTTCGACATCAAGAACGGCGACCTCACCTTCGACGAGAAGATCTCGGCCAAGCCGAGCACCTGA
PROTEIN sequence
Length: 425
LSQRRSGLLAAGVAVVALSFGLAACGGSDDDGGGSGSGTGANEVSIYSSFPLQGASRPTGISLQNGVQLALEQAGNKAGGVDINFVPLDDSTAQAGEWTPEAESANAKKAVQDDSAVAYIGTYNSGAAAISIPILNEAGLAMLSPGNTAVGLTSDAPGADTGIGEPDIYYPTGERNYARIVPKDTVQGAALAGLMDEDGCTKVGVLNDNEVYGKGLAANVIDAGSKFDYEFADGGAIDTQAANFRSTAKDFASQGVDCFVFGGITASNAVQLYKDMGAAMPDAKLYGPDGVGDSDFAGGLPADVASRTKVTVPTLSQEAYGKEGAKFFKDYAAKFGEDENKIGPFAIYGYEAGKLILDVLDRAEDPTNRADVVKAMFDTKDRNSILGKYSIDENGDTTLTDYGVFDIKNGDLTFDEKISAKPST*