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SCNpilot_BF_INOC_Solirubrobacterales_68_14

SCNPILOT_EXPT_1000_BF_Actinobacteria_66_5
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1-50 of 374 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_6213
Phylum: Actinobacteria (64.44%)
45 44426 bp 66.62 5.85 84.75
SCNpilot_expt_1000_bf_scaffold_3552
Species: Conexibacter woesei (51.28%)
39 36006 bp 63.82 5.25 81.83
SCNpilot_expt_1000_bf_scaffold_3449
Domain: Bacteria (55.56%)
36 25523 bp 66.83 5.72 84.55
SCNpilot_expt_1000_bf_scaffold_5976
Order: Solirubrobacterales (57.58%)
33 28210 bp 67.06 5.76 90.60
SCNpilot_expt_1000_bf_scaffold_4780
Phylum: Actinobacteria (67.86%)
28 28323 bp 66.43 5.51 88.69
SCNpilot_expt_1000_bf_scaffold_1993
Phylum: Actinobacteria (64.29%)
28 24429 bp 66.47 6.07 94.02
SCNpilot_expt_1000_bf_scaffold_9622
Phylum: Actinobacteria (65.38%)
26 26055 bp 65.60 5.32 82.07
SCNpilot_expt_1000_bf_scaffold_3465
Order: Solirubrobacterales (52%)
25 22713 bp 64.66 5.27 86.87
SCNpilot_expt_1000_bf_scaffold_2236
Order: Solirubrobacterales (54.17%)
24 22235 bp 68.73 6.31 88.10
SCNpilot_expt_1000_bf_scaffold_4491
Phylum: Actinobacteria (56.52%)
23 19563 bp 66.69 5.35 88.33
SCNpilot_expt_1000_bf_scaffold_3469
Species: Conexibacter woesei (54.55%)
22 18537 bp 67.56 5.39 92.18
SCNpilot_expt_1000_bf_scaffold_4499
Phylum: Actinobacteria (52.38%)
21 16348 bp 64.55 5.14 82.80
SCNpilot_expt_1000_bf_scaffold_6847
Phylum: Actinobacteria (52.38%)
21 17801 bp 64.83 5.46 77.68
SCNpilot_expt_1000_bf_scaffold_6298
Phylum: Actinobacteria (60%)
20 14241 bp 65.71 5.21 86.98
SCNpilot_expt_1000_bf_scaffold_4931
Order: Solirubrobacterales (65%)
20 17535 bp 65.24 5.72 83.52
SCNpilot_expt_1000_bf_scaffold_4260
Phylum: Actinobacteria (73.68%)
19 19491 bp 65.91 5.23 88.83
SCNpilot_expt_1000_bf_scaffold_10817
Phylum: Actinobacteria (52.63%)
19 13455 bp 65.40 5.00 86.67
SCNpilot_expt_1000_bf_scaffold_6457
Phylum: Actinobacteria (63.16%)
19 14946 bp 65.82 5.60 87.27
SCNpilot_expt_1000_bf_scaffold_4761
Order: Solirubrobacterales (50%)
18 15628 bp 67.17 5.73 93.91
SCNpilot_expt_1000_bf_scaffold_11307
Domain: Bacteria (72.22%)
18 18161 bp 65.52 5.33 86.92
SCNpilot_expt_1000_bf_scaffold_11314 18 10491 bp 60.61 5.10 83.67
SCNpilot_expt_1000_bf_scaffold_4533
Phylum: Actinobacteria (55.56%)
18 12551 bp 64.50 4.96 89.97
SCNpilot_expt_1000_bf_scaffold_4941
Order: Solirubrobacterales (55.56%)
18 18790 bp 67.68 6.12 92.52
SCNpilot_expt_1000_bf_scaffold_3302
Order: Solirubrobacterales (66.67%)
18 14869 bp 67.37 6.27 89.42
SCNpilot_expt_1000_bf_scaffold_6071
Phylum: Actinobacteria (52.94%)
17 17400 bp 62.70 5.62 76.09
SCNpilot_expt_1000_bf_scaffold_2090
Phylum: Actinobacteria (58.82%)
17 15828 bp 68.86 6.07 93.40
SCNpilot_expt_1000_bf_scaffold_3229
Phylum: Actinobacteria (70.59%)
17 16982 bp 66.23 5.33 91.01
SCNpilot_expt_1000_bf_scaffold_4426
Phylum: Actinobacteria (52.94%)
17 14478 bp 65.09 5.16 87.09
SCNpilot_expt_1000_bf_scaffold_4701
Order: Solirubrobacterales (58.82%)
17 17817 bp 67.50 5.54 89.91
SCNpilot_expt_1000_bf_scaffold_3002
Order: Solirubrobacterales (52.94%)
17 14521 bp 69.31 7.01 88.34
SCNpilot_expt_1000_bf_scaffold_4984
Species: Conexibacter woesei (64.71%)
17 14255 bp 66.22 5.91 87.21
SCNpilot_expt_1000_bf_scaffold_4805
Class: Actinobacteria (50%)
16 13515 bp 57.06 5.81 88.95
SCNpilot_expt_1000_bf_scaffold_6346
Species: Conexibacter woesei (50%)
16 15101 bp 65.90 6.09 86.68
SCNpilot_expt_1000_bf_scaffold_4812
Species: Conexibacter woesei (56.25%)
16 16777 bp 64.43 5.71 82.95
SCNpilot_expt_1000_bf_scaffold_11118
Order: Solirubrobacterales (50%)
16 12751 bp 66.07 5.90 81.10
SCNpilot_expt_1000_bf_scaffold_6994
Order: Solirubrobacterales (56.25%)
16 17503 bp 65.57 5.67 89.98
SCNpilot_expt_1000_bf_scaffold_10495
Domain: Bacteria (56.25%)
16 14722 bp 64.19 5.11 77.21
SCNpilot_expt_1000_bf_scaffold_4269
Domain: Bacteria (66.67%)
15 13976 bp 66.51 5.69 90.03
SCNpilot_expt_1000_bf_scaffold_6064
Order: Solirubrobacterales (53.33%)
15 12008 bp 66.00 5.33 93.69
SCNpilot_expt_1000_bf_scaffold_7310
Phylum: Actinobacteria (53.33%)
15 14679 bp 67.08 6.13 87.35
SCNpilot_expt_1000_bf_scaffold_13768
Domain: Bacteria (73.33%)
15 10662 bp 67.84 6.50 90.07
SCNpilot_expt_1000_bf_scaffold_3915
Order: Solirubrobacterales (66.67%)
15 12499 bp 66.80 6.12 92.17
SCNpilot_expt_1000_bf_scaffold_5231 15 13029 bp 62.25 5.35 88.21
SCNpilot_expt_1000_bf_scaffold_6696
Order: Solirubrobacterales (53.33%)
15 12355 bp 66.36 5.42 87.63
SCNpilot_expt_1000_bf_scaffold_5296
Phylum: Actinobacteria (53.33%)
15 14697 bp 68.29 5.56 91.92
SCNpilot_expt_1000_bf_scaffold_3526
Phylum: Actinobacteria (53.33%)
15 17310 bp 67.46 5.44 81.56
SCNpilot_expt_1000_bf_scaffold_4507
Class: Actinobacteria (50%)
14 15609 bp 64.89 6.71 66.88
SCNpilot_expt_1000_bf_scaffold_6814
Phylum: Actinobacteria (57.14%)
14 11851 bp 67.16 6.18 97.18
SCNpilot_expt_1000_bf_scaffold_5668
Domain: Bacteria (71.43%)
14 12806 bp 65.66 5.06 96.85
SCNpilot_expt_1000_bf_scaffold_11615
Class: Actinobacteria (50%)
14 14826 bp 66.12 5.75 93.40
Displaying items 1-50 of 374 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.