ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10817

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10817_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3..1109
DNA (1107bp) protein (369aa)
UvrABC system protein C n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V4_CONWI
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_10817_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1156..2052
DNA (897bp) protein (299aa)
UPF0042 nucleotide-binding protein Cwoe_4535 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V3_CONWI rbh
hypothetical protein; K06958 UPF0042 nucleotide-binding protein rbh
Nucleotide-binding protein Cwoe_4535 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_10817_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2166..3083
DNA (918bp) protein (306aa)
ABC transporter n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HJQ4_STRPR rbh
Uncharacterized protein {ECO:0000313|EMBL:KDS86488.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
ABC-type multidrug transport system, ATPase component rbh
SCNpilot_expt_1000_bf_scaffold_10817_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3080..3487
DNA (408bp) protein (136aa)
hypothetical protein, partial n=1 Tax=Streptomyces sulphureus RepID=UPI000374689A
ABC-2 type transporter
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
SCNpilot_expt_1000_bf_scaffold_10817_5
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3484..3831
DNA (348bp) protein (116aa)
ABC-2 type transporter n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HJQ5_STRPR
putative multidrug ABC transporter permease protein
Tax=RBG_16_Actinobacteria_68_21_curated
SCNpilot_expt_1000_bf_scaffold_10817_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

4004..4510
DNA (507bp) protein (169aa)
Putative translation initiation inhibitor, yjgF family id=4737852 bin=GWC2_Chloroflexi_73_18 species=Pseudomonas sp. GM17 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Endoribonuclease
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_1000_bf_scaffold_10817_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

4503..5696
DNA (1194bp) protein (398aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4737853 bin=GWC2_Chloroflexi_73_18 species=Pseudomonas sp. GM17 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_1000_bf_scaffold_10817_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5703..6404
DNA (702bp) protein (234aa)
GntR domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD65_CONWI
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
GntR domain protein {ECO:0000313|EMBL:ADB53457.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_10817_9
unknown

Not on your lists

comp(6673..6858)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10817_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

7043..7276
DNA (234bp) protein (78aa)
Branched-chain amino acid ABC-type transport system, permease component id=4737854 bin=GWC2_Chloroflexi_73_18 species=Pseudomonas sp. GM17 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_1000_bf_scaffold_10817_11
unknown

Not on your lists

comp(7527..7655)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10817_12
unknown

Not on your lists

comp(7672..8628)
DNA (957bp) protein (319aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10817_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8856..9197
DNA (342bp) protein (114aa)
sulfate-transporting ATPase (EC:3.6.3.25); K01995 branched-chain amino acid transport system ATP-binding protein
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037EBBAD
Sugar ABC transporter ATPase {ECO:0000313|EMBL:EYT55496.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
SCNpilot_expt_1000_bf_scaffold_10817_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9197..9898
DNA (702bp) protein (234aa)
ABC transporter related protein id=4737869 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
livF; branched chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_1000_bf_scaffold_10817_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10103..11446
DNA (1344bp) protein (448aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase id=4737871 bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_expt_1000_bf_scaffold_10817_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11443..11823
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM3_CONWI
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ADB51186.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_10817_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11825..12262
DNA (438bp) protein (146aa)
Membrane protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM2_CONWI
membrane protein
Membrane protein {ECO:0000313|EMBL:ADB51185.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_10817_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12348..12710
DNA (363bp) protein (121aa)
Putative dioxygenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HY42_AZOC5
dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAF87572.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_expt_1000_bf_scaffold_10817_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12952..13455
DNA (504bp) protein (168aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8U8_CONWI
Displaying 19 items

View Taxonomy