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SCNpilot_expt_1000_bf_scaffold_3526

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3526_1
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

717..1430
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X337_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EXI79896.1}; Flags: Precursor;; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1427..1705
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=V8R1B7_9PSED
Uncharacterized protein {ECO:0000313|EMBL:CEO58234.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_3
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1823..2488
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E6Z6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKZ95354.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_4
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..2910
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S456_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP42695.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_5
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2929..3717)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JUA7_ARTS2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABK02627.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_expt_1000_bf_scaffold_3526_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3746..4330
DNA (585bp) protein (195aa)
G/U mismatch-specific uracil-DNA glycosylase (EC:3.2.2.-); K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-]
G:T/U mismatch-specific uracil/thymine DNA-glycosylase n=1 Tax=Patulibacter medicamentivorans RepID=H0E749_9ACTN rbh
G:T/U mismatch-specific uracil/thymine DNA-glycosylase {ECO:0000313|EMBL:EHN10494.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_expt_1000_bf_scaffold_3526_7
unknown

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4833..4976
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3526_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5878..6759
DNA (882bp) protein (294aa)
cellulose 1,4-beta-cellobiosidase (EC:3.2.1.91)
Secreted hydrolase n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Z2_9ACTN rbh
Secreted hydrolase {ECO:0000313|EMBL:EHN10190.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_expt_1000_bf_scaffold_3526_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6805..7467
DNA (663bp) protein (221aa)
Two-component response regulator n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Z3_9ACTN rbh
Two-component response regulator {ECO:0000313|EMBL:EHN10191.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Two-component response regulator
SCNpilot_expt_1000_bf_scaffold_3526_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7464..8750
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Two-component system sensor kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E7Z4_9ACTN rbh
histidine kinase
SCNpilot_expt_1000_bf_scaffold_3526_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9075..10913
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E0M4_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN12758.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_expt_1000_bf_scaffold_3526_12
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11189..12934)
DNA (1746bp) protein (582aa)
Subtilase family protein n=2 Tax=Microcystis aeruginosa RepID=L8NSR6_MICAE
Similar to tr|Q12JK6|Q12JK6_SHEDO Peptidase S8 and S53 {ECO:0000313|EMBL:CAO90033.1}; TaxID=267872 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 7806.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_13
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13032..15764)
DNA (2733bp) protein (911aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI000361ECBD
Uncharacterized protein {ECO:0000313|EMBL:AJK59641.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3526_14
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15873..16898
DNA (1026bp) protein (342aa)
Dyp-type peroxidase n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JQG6_9NOCA rbh
Dyp-type peroxidase {ECO:0000313|EMBL:EHK84073.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
dyp-type peroxidase; K07223 putative iron-dependent peroxidase rbh
SCNpilot_expt_1000_bf_scaffold_3526_15
unknown

Not on your lists

17008..17310
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 15 items

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