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SCNpilot_expt_1000_bf_scaffold_3915

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3915_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Homoserine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F245_CONWI
SCNpilot_expt_1000_bf_scaffold_3915_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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209..592
DNA (384bp) protein (128aa)
ABC transporter ATP-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1S4_9ACTN
ABC transporter; K09687 antibiotic transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHN12375.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
SCNpilot_expt_1000_bf_scaffold_3915_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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571..990
DNA (420bp) protein (140aa)
ABC transporter ATP-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1S4_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHN12375.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_3915_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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987..1754
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1S3_9ACTN rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_3915_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2409..3443)
DNA (1035bp) protein (345aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] rbh
Threonine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F244_CONWI rbh
Threonine synthase {ECO:0000313|EMBL:ADB50219.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3915_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3465..4691)
DNA (1227bp) protein (409aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Homoserine dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F243_CONWI rbh
SCNpilot_expt_1000_bf_scaffold_3915_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4688..5950)
DNA (1263bp) protein (421aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Diaminopimelate decarboxylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F242_CONWI rbh
SCNpilot_expt_1000_bf_scaffold_3915_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6057..7280
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F230_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50205.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3915_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7277..7519
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F229_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50204.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3915_10
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7534..8205
DNA (672bp) protein (224aa)
Metallo-beta-lactamase family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYY9_9BACT
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EAY24425.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
beta-lactamase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3915_11
Streptomyces ambofaciens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8224..9132)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036BEA11
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=278992 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ambofaciens ATCC 23877.;"
putative membrane efflux protein
SCNpilot_expt_1000_bf_scaffold_3915_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(9296..10324)
DNA (1029bp) protein (343aa)
luciferase family protein id=14425789 bin=bin1_lowGC species=Sphingomonas sp. KC8 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
luciferase family protein
Tax=CSP1_2_Dadabacteria
SCNpilot_expt_1000_bf_scaffold_3915_13
unknown

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10429..11151
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3915_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11135..12112
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E772_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10447.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3915_15
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12028..12498)
DNA (471bp) protein (157aa)
3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CCW10849.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CCW10849.1};; EC=2.3.1.9 {ECO:0000313|EMBL:CCW10849.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI00031C13F4
Displaying 15 items

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