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SCNpilot_expt_1000_bf_scaffold_4491

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4491_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

590..1555
DNA (966bp) protein (322aa)
Fibronectin type III domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E82_STIAD
Chitodextrinase {ECO:0000313|EMBL:GAM11586.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4491_2
unknown

Not on your lists

1559..2125
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4491_3
unknown

Not on your lists

2154..2303
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4491_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2318..3103
DNA (786bp) protein (262aa)
Glucose/sorbosone dehydrogenase-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1A7_CONWI
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:ADB52070.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_4491_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3290..4282
DNA (993bp) protein (331aa)
Glucose/sorbosone dehydrogenase-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1A7_CONWI
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:ADB52070.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_4491_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4237..5454)
DNA (1218bp) protein (406aa)
Putative transmembrane efflux pump (Multidrug resistance related protein) n=1 Tax=Patulibacter medicamentivorans RepID=H0E8M9_9ACTN
Putative transmembrane efflux pump (Multidrug resistance related protein) {ECO:0000313|EMBL:EHN10029.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
major facilitator superfamily protein
SCNpilot_expt_1000_bf_scaffold_4491_7
unknown

Not on your lists

5503..5607
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4491_8
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5983..6441
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Streptomyces sp. W007 RepID=H0BPI6_9ACTO
MarR family transcriptional regulator {ECO:0000313|EMBL:KIZ20536.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
MarR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4491_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6445..7227
DNA (783bp) protein (261aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003657413
Tax=RBG_16_Actinobacteria_68_12_curated
SCNpilot_expt_1000_bf_scaffold_4491_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7362..8360)
DNA (999bp) protein (333aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Dihydrolipoamide dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAD2_CONWI
SCNpilot_expt_1000_bf_scaffold_4491_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8381..8743)
DNA (363bp) protein (121aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Dihydrolipoamide dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAD2_CONWI
SCNpilot_expt_1000_bf_scaffold_4491_12
unknown

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comp(8813..9820)
DNA (1008bp) protein (336aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4491_13

Not on your lists

comp(9877..10329)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK76681.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_4491_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10403..11107)
DNA (705bp) protein (235aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
Thiamine-phosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAD4_CONWI
SCNpilot_expt_1000_bf_scaffold_4491_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11267..12421
DNA (1155bp) protein (385aa)
glycine oxidase ThiO; K03153 glycine oxidase [EC:1.4.3.19] rbh
glycine oxidase n=1 Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI00037758E0 rbh
Glycine oxidase ThiO {ECO:0000313|EMBL:ACY98575.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_expt_1000_bf_scaffold_4491_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12421..13419
DNA (999bp) protein (333aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Thiazole synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAD9_CONWI rbh
thiazole biosynthesis protein; K03149 thiamine biosynthesis ThiG rbh
SCNpilot_expt_1000_bf_scaffold_4491_17
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13460..14281
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BQ89_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ42700.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_1000_bf_scaffold_4491_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14274..14837
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCN6_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EXG79754.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
regulatory protein TetR
SCNpilot_expt_1000_bf_scaffold_4491_19
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

15062..16606
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N5P1_9CYAN
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_expt_1000_bf_scaffold_4491_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16603..18198)
DNA (1596bp) protein (532aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] rbh
Bifunctional purine biosynthesis protein PurH n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAJ1_CONWI rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_4491_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18243..18917)
DNA (675bp) protein (225aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAJ0_CONWI
SCNpilot_expt_1000_bf_scaffold_4491_22
unknown

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19123..19338
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Nocardiopsis alkaliphila RepID=UPI0003492A60
SCNpilot_expt_1000_bf_scaffold_4491_23
unknown

Not on your lists

comp(19409..19561)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 23 items

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