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SCNpilot_expt_1000_bf_scaffold_3449

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3449_1

Not on your lists

comp(2..229)
DNA (228bp) protein (76aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL60822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_3449_2

Not on your lists

comp(220..600)
DNA (381bp) protein (127aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK6_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL60823.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_3449_3

Not on your lists

752..1231
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK5_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL60824.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3449_4
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1238..1885)
DNA (648bp) protein (216aa)
NAD-dependent dehydratase n=1 Tax=Streptomyces canus RepID=UPI00035D494D
oxidoreductase ylbE
Oxidoreductase ylbE {ECO:0000313|EMBL:CCA57612.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
SCNpilot_expt_1000_bf_scaffold_3449_5
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1912..2331)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003674882
Putative epimerase, PhzC/PhzF-like protein {ECO:0000313|EMBL:AJQ94313.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
SCNpilot_expt_1000_bf_scaffold_3449_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2770..3123)
DNA (354bp) protein (118aa)
NADH-FMN oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E137_9ACTN
NADH-FMN oxidoreductase {ECO:0000313|EMBL:EHN12612.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
putative oxidoreductase; flavin reductase domain protein, FMN-binding
SCNpilot_expt_1000_bf_scaffold_3449_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3297..3749
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK3_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49577.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3449_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3765..5030
DNA (1266bp) protein (422aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:EHN12607.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EHN12607.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Seryl-tRNA synthetase n=1 Tax=Patulibacter medicamentivorans RepID=H0E132_9ACTN rbh
SCNpilot_expt_1000_bf_scaffold_3449_9
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5027..5695
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UKU8_9DELT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EPR32943.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
LuxR family transcriptional regulator; K07692 two-component system, NarL family, response regulator DegU
SCNpilot_expt_1000_bf_scaffold_3449_10
R_RIF_OD1_13_51_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(5709..6110)
DNA (402bp) protein (134aa)
similar to transcriptional regulator; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CEP8_9BACT
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_13_51_17_curated
SCNpilot_expt_1000_bf_scaffold_3449_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6182..6721
DNA (540bp) protein (180aa)
Allergen V5/Tpx-1 related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYU6_RUBXD
allergen V5/Tpx-1-like protein
Allergen V5/Tpx-1 related {ECO:0000313|EMBL:ABG03432.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_expt_1000_bf_scaffold_3449_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6804..8798
DNA (1995bp) protein (665aa)
acetate/CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetate/CoA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ7_CONWI rbh
Acetate/CoA ligase {ECO:0000313|EMBL:ADB49571.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3449_13
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

8831..9448
DNA (618bp) protein (206aa)
Tax=RBG_13_Aminicenantes_63_10_curated
SCNpilot_expt_1000_bf_scaffold_3449_14
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9545..10384)
DNA (840bp) protein (280aa)
transcriptional regulator n=1 Tax=Streptomyces canus RepID=UPI00036F1FD7
Transcriptional regulator {ECO:0000313|EMBL:KJY18361.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
Transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3449_15
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10384..11127)
DNA (744bp) protein (248aa)
Transcriptional regulator, PucR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZD6_CONWI
CdaR family transcriptional regulator {ECO:0000313|EMBL:KJS54416.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
PucR family transcriptional regulator; K09684 purine catabolism regulatory protein
SCNpilot_expt_1000_bf_scaffold_3449_16
unknown

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comp(11156..12175)
DNA (1020bp) protein (340aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_17
unknown

Not on your lists

comp(12228..12401)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_18
unknown

Not on your lists

12430..13194
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_19
unknown

Not on your lists

comp(13286..13807)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14023..14292)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ4_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49568.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3449_21
unknown

Not on your lists

14423..15103
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15107..15622)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F051_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50027.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3449_23
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15958..16902
DNA (945bp) protein (315aa)
Sulfotransferase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KLK0_CYAP7
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ACK72572.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
SCNpilot_expt_1000_bf_scaffold_3449_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16940..17668
DNA (729bp) protein (243aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA07_CONWI
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB53102.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_expt_1000_bf_scaffold_3449_25

Not on your lists

17744..18970
DNA (1227bp) protein (409aa)
Acyl-CoA dehydrogenase n=1 Tax=Geobacillus sp. JF8 RepID=S5Z2X7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKL64876.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acyl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_3449_26
unknown

Not on your lists

comp(18995..19222)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_27
unknown

Not on your lists

comp(19242..19457)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_28
unknown

Not on your lists

comp(19483..20043)
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3449_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20071..20304)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E3D8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11805.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3449_30
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20289..21173)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E3D8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN11805.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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